Sebastes minor
GC content
44.96%
Whole genome
Non-coding
815 bp
D-loop 745 bp
Where Sebastes minor sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sebastes minor has the 1,514th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,408 bp
- GC skew (G − C) / (G + C)
- −0.229
- AT skew (A − T) / (A + T)
- +0.010
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,408 bp
Protein-coding11,407 bp
12S rRNA943 bp
16S rRNA1,693 bp
All tRNA1,551 bp
D-loop745 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.05% | −0.305 | −0.137 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 46.37% | −0.373 | −0.016 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.94% | −0.199 | −0.091 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.97% | −0.234 | +0.002 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.83% | −0.429 | +0.121 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.96% | −0.408 | −0.053 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.37% | −0.225 | −0.074 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.14% | −0.286 | −0.215 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.48% | −0.248 | −0.179 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.26% | −0.283 | −0.077 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 42.74% | −0.326 | −0.024 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.333 | +0.385 | |||||
| CYTBCytochrome b | 1,141 bp | 44.44% | −0.290 | −0.095 | |||||
| 12S rRNA12S ribosomal RNA | 943 bp | 50.37% | −0.091 | +0.192 | |||||
| 16S rRNA16S ribosomal RNA | 1,693 bp | 46.19% | −0.087 | +0.203 | |||||
| D-loopControl region (D-loop) | 745 bp | 35.44% | 0.000 | +0.056 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU127
UUC103
Leu L17.5%
UUA127
UUG34
CUU171
CUC125
CUA157
CUG53
Ile I6.9%
AUU186
AUC78
Met M3.9%
AUA100
AUG49
Val V6.0%
GUU61
GUC52
GUA90
GUG26
Ser S6.3%
UCU45
UCC57
UCA70
UCG6
AGU18
AGC43
Pro P5.8%
CCU51
CCC101
CCA56
CCG12
Thr T7.8%
ACU56
ACC113
ACA117
ACG12
Ala A9.4%
GCU75
GCC147
GCA115
GCG20
Tyr Y3.0%
UAU57
UAC56
His H2.7%
CAU37
CAC67
Gln Q2.5%
CAA80
CAG16
Asn N3.0%
AAU54
AAC60
Lys K1.9%
AAA54
AAG20
Asp D2.1%
GAU30
GAC51
Glu E2.5%
GAA67
GAG29
Cys C0.7%
UGU7
UGC18
Trp W3.1%
UGA102
UGG17
Arg R2.1%
CGU8
CGC20
CGA39
CGG12
Gly G6.5%
GGU48
GGC82
GGA68
GGG48
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_027444.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,011 | 943 bp | + | 50.4% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,779 | 1,693 bp | + | 46.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,780 | 2,853 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,854 | 3,828 | 975 bp | + | 46.1% |
| tRNA-Ile | Transfer RNA | 3,833 | 3,901 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,902 | 3,972 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,972 | 4,042 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,043 | 5,088 | 1,046 bp | + | 46.4% |
| tRNA-Trp | Transfer RNA | 5,089 | 5,159 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,161 | 5,229 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,232 | 5,303 | 72 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,343 | 5,406 | 64 bp | + | – |
| tRNA-Tyr | Transfer RNA | 5,407 | 5,477 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,479 | 7,029 | 1,551 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,029 | 7,100 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,104 | 7,176 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,183 | 7,873 | 691 bp | + | 42.0% |
| tRNA-Lys | Transfer RNA | 7,874 | 7,947 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,949 | 8,116 | 168 bp | + | 45.8% |
| ATP6 | Protein-coding gene | 8,107 | 8,790 | 684 bp | + | 42.0% |
| COX3 | Protein-coding gene | 8,790 | 9,574 | 785 bp | + | 46.4% |
| tRNA-Gly | Transfer RNA | 9,575 | 9,646 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,647 | 9,995 | 349 bp | + | 48.1% |
| tRNA-Arg | Transfer RNA | 9,996 | 10,064 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,065 | 10,361 | 297 bp | + | 47.5% |
| ND4 | Protein-coding gene | 10,355 | 11,735 | 1,381 bp | + | 45.3% |
| tRNA-His | Transfer RNA | 11,736 | 11,804 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,805 | 11,872 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,877 | 11,949 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,950 | 13,788 | 1,839 bp | + | 42.7% |
| ND6 | Protein-coding gene | 13,785 | 14,306 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 14,307 | 14,375 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,382 | 15,522 | 1,141 bp | + | 44.4% |
| tRNA-Thr | Transfer RNA | 15,523 | 15,594 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,594 | 15,663 | 70 bp | − | – |
| D-loop | Control region | 15,664 | 16,408 | 745 bp | – | 35.4% |