Sebastes rubrivinctus

Flag rockfish

Maximum lifespan

18 yr

AnAge record

mtDNA size

16,895 bp

RefSeq NC_039777.1

GC content

45.01%

Whole genome

Non-coding

1,300 bp

D-loop 1,226 bp

Where Flag rockfish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Flag rockfish has the 1,043rd longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,895 bp

GC skew (G − C) / (G + C): −0.259
AT skew (A − T) / (A + T): +0.029

Life history

Maximum lifespan: 18 years
Adult weight: 797.5 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04543)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,895 bp

Protein-coding11,407 bp

12S rRNA943 bp

16S rRNA1,694 bp

All tRNA1,552 bp

D-loop1,226 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Sebastes rubrivinctus genes

ND1NADH dehydrogenase subunit 1	975 bp	23.5%	29.8%	15.5%	31.2%	46.67%	−0.336	−0.119
ND2NADH dehydrogenase subunit 2	1,046 bp	27.0%	26.5%	13.5%	33.1%	46.56%	−0.421	+0.009
COX1Cytochrome c oxidase subunit I	1,551 bp	24.6%	29.7%	18.4%	27.2%	45.65%	−0.192	−0.094
COX2Cytochrome c oxidase subunit II	691 bp	28.7%	28.1%	16.5%	26.8%	43.27%	−0.237	+0.010
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	24.4%	13.7%	33.3%	47.02%	−0.418	+0.079
ATP6ATP synthase F0 subunit 6	684 bp	26.8%	28.7%	13.3%	31.3%	44.59%	−0.403	−0.034
COX3Cytochrome c oxidase subunit III	785 bp	25.4%	27.9%	16.9%	29.8%	46.75%	−0.275	−0.048
ND3NADH dehydrogenase subunit 3	349 bp	21.2%	31.2%	15.8%	31.8%	47.56%	−0.337	−0.191
ND4LNADH dehydrogenase subunit 4L	297 bp	21.5%	31.0%	16.8%	30.6%	47.48%	−0.291	−0.179
ND4NADH dehydrogenase subunit 4	1,381 bp	25.9%	28.1%	15.2%	30.8%	45.98%	−0.339	−0.040
ND5NADH dehydrogenase subunit 5	1,839 bp	28.1%	28.1%	14.1%	29.7%	43.83%	−0.357	+0.001
ND6NADH dehydrogenase subunit 6	522 bp	37.2%	15.3%	14.2%	33.3%	47.51%	−0.403	+0.416
CYTBCytochrome b	1,141 bp	25.2%	29.8%	15.6%	29.4%	44.96%	−0.306	−0.083
12S rRNA12S ribosomal RNA	943 bp	30.1%	19.7%	22.3%	27.9%	50.16%	−0.112	+0.209
16S rRNA16S ribosomal RNA	1,694 bp	32.5%	21.4%	20.9%	25.1%	46.05%	−0.092	+0.206
D-loopControl region (D-loop)	1,226 bp	36.1%	30.1%	13.4%	20.1%	33.55%	−0.200	+0.091

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU113

UUC117

Leu L17.4%

UUA123

UUG23

CUU161

CUC138

CUA169

CUG49

Ile I6.9%

AUU174

AUC88

Met M3.9%

AUA97

AUG50

Val V6.0%

GUU65

GUC53

GUA81

GUG31

Ser S6.3%

UCU48

UCC55

UCA71

UCG8

AGU14

AGC42

Pro P5.8%

CCU47

CCC109

CCA53

CCG12

Thr T8.1%

ACU45

ACC128

ACA122

ACG12

Ala A9.4%

GCU66

GCC164

GCA110

GCG16

Tyr Y2.9%

UAU49

UAC63

His H2.7%

CAU31

CAC73

Gln Q2.5%

CAA82

CAG14

Asn N3.0%

AAU52

AAC61

Lys K2.0%

AAA53

AAG22

Asp D2.1%

GAU27

GAC52

Glu E2.5%

GAA73

GAG23

Cys C0.7%

UGU8

UGC18

Trp W3.1%

UGA103

UGG16

Arg R2.1%

CGU9

CGC20

CGA42

CGG8

Gly G6.5%

GGU49

GGC80

GGA73

GGG45

Stop 0.2%

UAA6

UAG1

AGA0

AGG0

Genome map

38 annotated features in NC_039777.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Sebastes rubrivinctus (NC_039777.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,011	943 bp	+	50.2%
tRNA-Val	Transfer RNA	1,015	1,086	72 bp	+	–
16S rRNA	Ribosomal RNA	1,087	2,780	1,694 bp	+	46.1%
tRNA-Leu (UUR)	Transfer RNA	2,781	2,854	74 bp	+	–
ND1	Protein-coding gene	2,855	3,829	975 bp	+	46.7%
tRNA-Ile	Transfer RNA	3,834	3,902	69 bp	+	–
tRNA-Gln	Transfer RNA	3,903	3,975	73 bp	−	–
tRNA-Met	Transfer RNA	3,975	4,045	71 bp	+	–
ND2	Protein-coding gene	4,046	5,091	1,046 bp	+	46.6%
tRNA-Trp	Transfer RNA	5,092	5,162	71 bp	+	–
tRNA-Ala	Transfer RNA	5,164	5,232	69 bp	−	–
tRNA-Asn	Transfer RNA	5,236	5,307	72 bp	−	–
tRNA-Cys	Transfer RNA	5,350	5,413	64 bp	+	–
tRNA-Tyr	Transfer RNA	5,414	5,483	70 bp	−	–
COX1	Protein-coding gene	5,485	7,035	1,551 bp	+	45.7%
tRNA-Ser (UCN)	Transfer RNA	7,035	7,106	72 bp	−	–
tRNA-Asp	Transfer RNA	7,110	7,182	73 bp	+	–
COX2	Protein-coding gene	7,189	7,879	691 bp	+	43.3%
tRNA-Lys	Transfer RNA	7,880	7,953	74 bp	+	–
ATP8	Protein-coding gene	7,955	8,122	168 bp	+	47.0%
ATP6	Protein-coding gene	8,113	8,796	684 bp	+	44.6%
COX3	Protein-coding gene	8,796	9,580	785 bp	+	46.8%
tRNA-Gly	Transfer RNA	9,581	9,652	72 bp	+	–
ND3	Protein-coding gene	9,653	10,001	349 bp	+	47.6%
tRNA-Arg	Transfer RNA	10,002	10,070	69 bp	+	–
ND4L	Protein-coding gene	10,071	10,367	297 bp	+	47.5%
ND4	Protein-coding gene	10,361	11,741	1,381 bp	+	46.0%
tRNA-His	Transfer RNA	11,742	11,810	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,811	11,878	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,883	11,955	73 bp	+	–
ND5	Protein-coding gene	11,956	13,794	1,839 bp	+	43.8%
ND6	Protein-coding gene	13,791	14,312	522 bp	−	47.5%
tRNA-Glu	Transfer RNA	14,313	14,381	69 bp	−	–
CYTB	Protein-coding gene	14,388	15,528	1,141 bp	+	45.0%
tRNA-Thr	Transfer RNA	15,529	15,600	72 bp	+	–
tRNA-Pro	Transfer RNA	15,600	15,669	70 bp	−	–
D-loop	Control region	15,670	16,895	1,226 bp	–	33.6%