Sebastes steindachneri
GC content
45.54%
Whole genome
Non-coding
856 bp
D-loop 599 bp
Where Sebastes steindachneri sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sebastes steindachneri has the 1,108th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,450 bp
- GC skew (G − C) / (G + C)
- −0.230
- AT skew (A − T) / (A + T)
- +0.005
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,450 bp
Protein-coding11,407 bp
12S rRNA943 bp
16S rRNA1,694 bp
All tRNA1,551 bp
D-loop599 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.49% | −0.292 | −0.152 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 46.46% | −0.370 | −0.025 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.07% | −0.182 | −0.099 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.69% | −0.227 | −0.005 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.385 | +0.067 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 43.28% | −0.399 | −0.052 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.37% | −0.247 | −0.064 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.42% | −0.290 | −0.244 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.15% | −0.259 | −0.195 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.62% | −0.302 | −0.071 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.43% | −0.319 | −0.035 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.85% | −0.333 | +0.371 | |||||
| CYTBCytochrome b | 1,141 bp | 45.14% | −0.289 | −0.099 | |||||
| 12S rRNA12S ribosomal RNA | 943 bp | 50.27% | −0.105 | +0.203 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 46.22% | −0.078 | +0.196 | |||||
| D-loopControl region (D-loop) | 599 bp | 34.06% | −0.078 | +0.053 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU124
UUC107
Leu L17.5%
UUA109
UUG33
CUU165
CUC132
CUA182
CUG45
Ile I6.6%
AUU177
AUC75
Met M3.8%
AUA84
AUG61
Val V6.3%
GUU71
GUC55
GUA84
GUG30
Ser S6.3%
UCU48
UCC54
UCA67
UCG12
AGU13
AGC45
Pro P5.8%
CCU58
CCC99
CCA49
CCG14
Thr T7.8%
ACU50
ACC119
ACA109
ACG20
Ala A9.5%
GCU73
GCC156
GCA110
GCG22
Tyr Y3.0%
UAU55
UAC58
His H2.7%
CAU36
CAC68
Gln Q2.5%
CAA80
CAG16
Asn N3.0%
AAU57
AAC57
Lys K1.9%
AAA49
AAG25
Asp D2.1%
GAU30
GAC50
Glu E2.5%
GAA65
GAG31
Cys C0.7%
UGU7
UGC19
Trp W3.1%
UGA104
UGG15
Arg R2.1%
CGU8
CGC23
CGA38
CGG11
Gly G6.5%
GGU50
GGC78
GGA75
GGG43
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_027445.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,011 | 943 bp | + | 50.3% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,780 | 1,694 bp | + | 46.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 47.5% |
| tRNA-Ile | Transfer RNA | 3,834 | 3,902 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,043 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,044 | 5,089 | 1,046 bp | + | 46.5% |
| tRNA-Trp | Transfer RNA | 5,090 | 5,160 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,162 | 5,230 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,233 | 5,304 | 72 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,346 | 5,409 | 64 bp | + | – |
| tRNA-Tyr | Transfer RNA | 5,410 | 5,480 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,482 | 7,032 | 1,551 bp | + | 45.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,032 | 7,103 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,107 | 7,179 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,186 | 7,876 | 691 bp | + | 42.7% |
| tRNA-Lys | Transfer RNA | 7,877 | 7,950 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,952 | 8,119 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,110 | 8,793 | 684 bp | + | 43.3% |
| COX3 | Protein-coding gene | 8,793 | 9,577 | 785 bp | + | 46.4% |
| tRNA-Gly | Transfer RNA | 9,578 | 9,649 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,650 | 9,998 | 349 bp | + | 48.4% |
| tRNA-Arg | Transfer RNA | 9,999 | 10,067 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,068 | 10,364 | 297 bp | + | 48.2% |
| ND4 | Protein-coding gene | 10,358 | 11,738 | 1,381 bp | + | 45.6% |
| tRNA-His | Transfer RNA | 11,739 | 11,807 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,808 | 11,875 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,880 | 11,952 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,953 | 13,791 | 1,839 bp | + | 44.4% |
| ND6 | Protein-coding gene | 13,788 | 14,309 | 522 bp | − | 48.9% |
| tRNA-Glu | Transfer RNA | 14,310 | 14,378 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,385 | 15,525 | 1,141 bp | + | 45.1% |
| tRNA-Thr | Transfer RNA | 15,526 | 15,597 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,597 | 15,666 | 70 bp | − | – |
| D-loop | Control region | 15,667 | 16,265 | 599 bp | – | 34.1% |