Seriola dumerili
Greater amberjack
GC content
47.66%
Whole genome
Non-coding
906 bp
D-loop 842 bp
Where Greater amberjack sits among 2,335 species
Whole-genome GC content against maximum lifespan. Greater amberjack has the 1,233rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,530 bp
- GC skew (G − C) / (G + C)
- −0.261
- AT skew (A − T) / (A + T)
- +0.026
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,530 bp
Protein-coding11,407 bp
12S rRNA950 bp
16S rRNA1,718 bp
All tRNA1,549 bp
D-loop842 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 49.95% | −0.318 | −0.086 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 49.90% | −0.406 | −0.023 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.97% | −0.218 | −0.088 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.56% | −0.249 | +0.010 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 48.21% | −0.432 | +0.149 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 48.39% | −0.353 | −0.076 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.92% | −0.271 | −0.062 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.72% | −0.367 | −0.116 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.84% | −0.404 | −0.233 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.44% | −0.333 | +0.003 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.04% | −0.364 | +0.016 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.28% | −0.365 | +0.430 | |||||
| CYTBCytochrome b | 1,141 bp | 48.99% | −0.363 | −0.058 | |||||
| 12S rRNA12S ribosomal RNA | 950 bp | 48.84% | −0.078 | +0.185 | |||||
| 16S rRNA16S ribosomal RNA | 1,718 bp | 47.38% | −0.079 | +0.184 | |||||
| D-loopControl region (D-loop) | 842 bp | 38.60% | −0.138 | −0.014 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU88
UUC154
Leu L17.3%
UUA79
UUG25
CUU150
CUC173
CUA168
CUG65
Ile I6.6%
AUU124
AUC127
Met M4.0%
AUA76
AUG77
Val V6.1%
GUU68
GUC84
GUA56
GUG26
Ser S6.0%
UCU32
UCC74
UCA50
UCG23
AGU9
AGC42
Pro P5.9%
CCU60
CCC103
CCA43
CCG19
Thr T7.8%
ACU53
ACC108
ACA114
ACG23
Ala A9.4%
GCU62
GCC164
GCA116
GCG17
Tyr Y2.9%
UAU29
UAC81
His H2.8%
CAU25
CAC83
Gln Q2.5%
CAA78
CAG16
Asn N3.1%
AAU28
AAC91
Lys K2.0%
AAA62
AAG14
Asp D2.1%
GAU17
GAC62
Glu E2.6%
GAA70
GAG30
Cys C0.6%
UGU7
UGC17
Trp W3.2%
UGA100
UGG20
Arg R2.1%
CGU8
CGC13
CGA46
CGG12
Gly G6.3%
GGU34
GGC80
GGA73
GGG52
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_016870.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,018 | 950 bp | + | 48.8% |
| tRNA-Val | Transfer RNA | 1,019 | 1,090 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,808 | 1,718 bp | + | 47.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,809 | 2,883 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,884 | 3,858 | 975 bp | + | 50.0% |
| tRNA-Ile | Transfer RNA | 3,863 | 3,932 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,932 | 4,002 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,002 | 4,070 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,071 | 5,116 | 1,046 bp | + | 49.9% |
| tRNA-Trp | Transfer RNA | 5,117 | 5,187 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,189 | 5,257 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,259 | 5,331 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,366 | 5,431 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,432 | 5,501 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,503 | 7,053 | 1,551 bp | + | 48.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,054 | 7,124 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,129 | 7,199 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,208 | 7,898 | 691 bp | + | 43.6% |
| tRNA-Lys | Transfer RNA | 7,899 | 7,973 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,975 | 8,142 | 168 bp | + | 48.2% |
| ATP6 | Protein-coding gene | 8,133 | 8,816 | 684 bp | + | 48.4% |
| COX3 | Protein-coding gene | 8,816 | 9,600 | 785 bp | + | 48.9% |
| tRNA-Gly | Transfer RNA | 9,601 | 9,671 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,672 | 10,020 | 349 bp | + | 50.7% |
| tRNA-Arg | Transfer RNA | 10,021 | 10,089 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,090 | 10,386 | 297 bp | + | 50.8% |
| ND4 | Protein-coding gene | 10,380 | 11,760 | 1,381 bp | + | 48.4% |
| tRNA-His | Transfer RNA | 11,761 | 11,829 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,830 | 11,896 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,901 | 11,973 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,974 | 13,812 | 1,839 bp | + | 47.0% |
| ND6 | Protein-coding gene | 13,809 | 14,330 | 522 bp | − | 48.3% |
| tRNA-Glu | Transfer RNA | 14,332 | 14,400 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,406 | 15,546 | 1,141 bp | + | 49.0% |
| tRNA-Thr | Transfer RNA | 15,547 | 15,618 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,618 | 15,688 | 71 bp | − | – |
| D-loop | Control region | 15,689 | 16,530 | 842 bp | – | 38.6% |