Siganus canaliculatus
White-spotted spinefoot
GC content
46.42%
Whole genome
Non-coding
899 bp
D-loop 829 bp
Where White-spotted spinefoot sits among 2,335 species
Whole-genome GC content against maximum lifespan. White-spotted spinefoot has the 1,787th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,492 bp
- GC skew (G − C) / (G + C)
- −0.281
- AT skew (A − T) / (A + T)
- +0.051
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,492 bp
Protein-coding11,404 bp
12S rRNA947 bp
16S rRNA1,692 bp
All tRNA1,550 bp
D-loop829 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.59% | −0.384 | −0.014 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 48.13% | −0.475 | +0.085 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.10% | −0.192 | −0.093 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.55% | −0.238 | −0.008 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.513 | +0.178 | |||||
| ATP6ATP synthase F0 subunit 6 | 682 bp | 47.51% | −0.438 | −0.028 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 47.70% | −0.283 | −0.039 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 46.99% | −0.329 | −0.200 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.403 | −0.133 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.71% | −0.358 | +0.014 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.04% | −0.394 | +0.055 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.13% | −0.447 | +0.435 | |||||
| CYTBCytochrome b | 1,141 bp | 48.82% | −0.379 | −0.003 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 48.36% | −0.087 | +0.211 | |||||
| 16S rRNA16S ribosomal RNA | 1,692 bp | 45.51% | −0.112 | +0.204 | |||||
| D-loopControl region (D-loop) | 829 bp | 37.76% | −0.099 | 0.000 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU67
UUC165
Leu L17.4%
UUA75
UUG18
CUU123
CUC180
CUA213
CUG54
Ile I7.1%
AUU148
AUC121
Met M3.9%
AUA72
AUG78
Val V6.0%
GUU58
GUC69
GUA78
GUG23
Ser S6.5%
UCU43
UCC83
UCA63
UCG8
AGU9
AGC40
Pro P5.8%
CCU57
CCC100
CCA59
CCG5
Thr T7.7%
ACU47
ACC111
ACA124
ACG12
Ala A9.1%
GCU68
GCC151
GCA118
GCG10
Tyr Y2.9%
UAU38
UAC71
His H2.8%
CAU27
CAC80
Gln Q2.7%
CAA84
CAG18
Asn N3.1%
AAU27
AAC90
Lys K2.0%
AAA71
AAG4
Asp D1.9%
GAU19
GAC54
Glu E2.7%
GAA83
GAG19
Cys C0.6%
UGU4
UGC19
Trp W3.1%
UGA107
UGG11
Arg R1.9%
CGU10
CGC12
CGA44
CGG8
Gly G6.6%
GGU32
GGC63
GGA96
GGG59
Stop 0.2%
UAA6
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_024881.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 48.4% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,779 | 1,692 bp | + | 45.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,780 | 2,853 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,854 | 3,828 | 975 bp | + | 47.6% |
| tRNA-Ile | Transfer RNA | 3,833 | 3,902 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,902 | 3,972 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,972 | 4,040 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,041 | 5,085 | 1,045 bp | + | 48.1% |
| tRNA-Trp | Transfer RNA | 5,086 | 5,157 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,158 | 5,226 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,229 | 5,301 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,336 | 5,401 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,402 | 5,472 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,474 | 7,024 | 1,551 bp | + | 46.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,027 | 7,097 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,101 | 7,172 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,181 | 7,871 | 691 bp | + | 42.6% |
| tRNA-Lys | Transfer RNA | 7,872 | 7,946 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,948 | 8,115 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,106 | 8,787 | 682 bp | + | 47.5% |
| COX3 | Protein-coding gene | 8,789 | 9,572 | 784 bp | + | 47.7% |
| tRNA-Gly | Transfer RNA | 9,574 | 9,646 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,647 | 9,995 | 349 bp | + | 47.0% |
| tRNA-Arg | Transfer RNA | 9,996 | 10,064 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,065 | 10,361 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,355 | 11,735 | 1,381 bp | + | 46.7% |
| tRNA-His | Transfer RNA | 11,736 | 11,804 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,805 | 11,872 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,880 | 11,952 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,953 | 13,791 | 1,839 bp | + | 47.0% |
| ND6 | Protein-coding gene | 13,788 | 14,309 | 522 bp | − | 47.1% |
| tRNA-Glu | Transfer RNA | 14,310 | 14,378 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,383 | 15,523 | 1,141 bp | + | 48.8% |
| tRNA-Thr | Transfer RNA | 15,526 | 15,597 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,595 | 15,663 | 69 bp | − | – |
| D-loop | Control region | 15,664 | 16,492 | 829 bp | – | 37.8% |