Sillago aeolus
Oriental sillago
GC content
48.46%
Whole genome
Non-coding
905 bp
D-loop 846 bp
Where Oriental sillago sits among 2,335 species
Whole-genome GC content against maximum lifespan. Oriental sillago has the 2,281st longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,499 bp
- GC skew (G − C) / (G + C)
- −0.227
- AT skew (A − T) / (A + T)
- −0.009
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,499 bp
Protein-coding11,407 bp
12S rRNA947 bp
16S rRNA1,691 bp
All tRNA1,550 bp
D-loop846 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.15% | −0.292 | −0.123 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 51.43% | −0.394 | −0.087 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.39% | −0.146 | −0.115 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 47.90% | −0.233 | −0.017 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.86% | −0.417 | +0.063 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 48.68% | −0.321 | −0.117 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 50.70% | −0.231 | −0.070 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 52.44% | −0.333 | −0.265 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.83% | −0.351 | −0.087 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 49.24% | −0.294 | −0.090 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.61% | −0.291 | −0.058 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.38% | −0.293 | +0.367 | |||||
| CYTBCytochrome b | 1,141 bp | 48.64% | −0.289 | −0.138 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 49.84% | −0.059 | +0.183 | |||||
| 16S rRNA16S ribosomal RNA | 1,691 bp | 47.75% | −0.097 | +0.204 | |||||
| D-loopControl region (D-loop) | 846 bp | 40.78% | −0.154 | +0.026 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU87
UUC144
Leu L17.3%
UUA60
UUG36
CUU180
CUC150
CUA150
CUG83
Ile I6.5%
AUU137
AUC111
Met M4.1%
AUA57
AUG98
Val V6.4%
GUU71
GUC71
GUA57
GUG45
Ser S6.4%
UCU45
UCC65
UCA53
UCG28
AGU12
AGC41
Pro P5.8%
CCU61
CCC94
CCA51
CCG13
Thr T7.8%
ACU59
ACC120
ACA94
ACG22
Ala A9.5%
GCU60
GCC165
GCA107
GCG28
Tyr Y3.0%
UAU35
UAC81
His H2.8%
CAU22
CAC86
Gln Q2.4%
CAA62
CAG30
Asn N3.0%
AAU40
AAC75
Lys K1.9%
AAA46
AAG28
Asp D2.0%
GAU21
GAC56
Glu E2.7%
GAA53
GAG49
Cys C0.7%
UGU7
UGC18
Trp W3.1%
UGA87
UGG32
Arg R2.0%
CGU13
CGC19
CGA32
CGG13
Gly G6.3%
GGU33
GGC100
GGA48
GGG57
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_025935.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 67 | 67 bp | + | – |
| 12S rRNA | Ribosomal RNA | 68 | 1,014 | 947 bp | + | 49.8% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,777 | 1,691 bp | + | 47.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,778 | 2,851 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,852 | 3,826 | 975 bp | + | 50.2% |
| tRNA-Ile | Transfer RNA | 3,831 | 3,900 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,900 | 3,970 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,970 | 4,039 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,040 | 5,085 | 1,046 bp | + | 51.4% |
| tRNA-Trp | Transfer RNA | 5,086 | 5,157 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,158 | 5,226 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,228 | 5,300 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,335 | 5,399 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,400 | 5,469 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,471 | 7,021 | 1,551 bp | + | 47.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,022 | 7,092 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,096 | 7,167 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,177 | 7,867 | 691 bp | + | 47.9% |
| tRNA-Lys | Transfer RNA | 7,868 | 7,941 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,943 | 8,110 | 168 bp | + | 42.9% |
| ATP6 | Protein-coding gene | 8,101 | 8,784 | 684 bp | + | 48.7% |
| COX3 | Protein-coding gene | 8,784 | 9,568 | 785 bp | + | 50.7% |
| tRNA-Gly | Transfer RNA | 9,569 | 9,639 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,640 | 9,988 | 349 bp | + | 52.4% |
| tRNA-Arg | Transfer RNA | 9,989 | 10,058 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,058 | 10,354 | 297 bp | + | 49.8% |
| ND4 | Protein-coding gene | 10,348 | 11,728 | 1,381 bp | + | 49.2% |
| tRNA-His | Transfer RNA | 11,729 | 11,797 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,798 | 11,865 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,868 | 11,940 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,941 | 13,779 | 1,839 bp | + | 48.6% |
| ND6 | Protein-coding gene | 13,776 | 14,297 | 522 bp | − | 50.4% |
| tRNA-Glu | Transfer RNA | 14,298 | 14,365 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,370 | 15,510 | 1,141 bp | + | 48.6% |
| tRNA-Thr | Transfer RNA | 15,511 | 15,582 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,582 | 15,653 | 72 bp | − | – |
| D-loop | Control region | 15,654 | 16,499 | 846 bp | – | 40.8% |