Sphyraena barracuda

Great barracuda

Maximum lifespan

14 yr

AnAge record

mtDNA size

16,707 bp

RefSeq NC_022484.1

GC content

45.86%

Whole genome

Non-coding

1,043 bp

D-loop 809 bp

Where Great barracuda sits among 2,335 species

Whole-genome GC content against maximum lifespan. Great barracuda has the 1,284th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,707 bp

GC skew (G − C) / (G + C): −0.294
AT skew (A − T) / (A + T): +0.068

Life history

Maximum lifespan: 14 years
Adult weight: 24 kg
Female sexual maturity: 4 years
Male sexual maturity: 2 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04398)

About this record

Lifespan source: AnAge build 15
Based on: an observed animal, origin not stated
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,707 bp

Protein-coding11,423 bp

12S rRNA953 bp

16S rRNA1,743 bp

All tRNA1,557 bp

D-loop809 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Sphyraena barracuda genes

ND1NADH dehydrogenase subunit 1	975 bp	27.1%	26.1%	14.4%	32.5%	46.87%	−0.387	+0.019
ND2NADH dehydrogenase subunit 2	1,050 bp	29.5%	24.1%	12.1%	34.3%	46.38%	−0.478	+0.101
COX1Cytochrome c oxidase subunit I	1,563 bp	24.6%	29.6%	17.9%	28.0%	45.87%	−0.222	−0.092
COX2Cytochrome c oxidase subunit II	691 bp	27.6%	26.6%	16.9%	28.8%	45.73%	−0.259	+0.019
ATP8ATP synthase F0 subunit 8	168 bp	33.3%	21.4%	10.1%	35.1%	45.24%	−0.553	+0.217
ATP6ATP synthase F0 subunit 6	683 bp	27.7%	27.2%	12.4%	32.7%	45.10%	−0.448	+0.008
COX3Cytochrome c oxidase subunit III	785 bp	26.1%	25.2%	17.2%	31.5%	48.66%	−0.293	+0.017
ND3NADH dehydrogenase subunit 3	349 bp	22.1%	30.1%	14.0%	33.8%	47.85%	−0.413	−0.154
ND4LNADH dehydrogenase subunit 4L	297 bp	24.2%	29.0%	13.5%	33.3%	46.80%	−0.424	−0.089
ND4NADH dehydrogenase subunit 4	1,381 bp	28.2%	25.8%	13.5%	32.5%	46.05%	−0.412	+0.044
ND5NADH dehydrogenase subunit 5	1,839 bp	29.6%	24.8%	13.1%	32.6%	45.62%	−0.428	+0.088
ND6NADH dehydrogenase subunit 6	522 bp	41.0%	13.4%	12.5%	33.1%	45.59%	−0.454	+0.507
CYTBCytochrome b	1,141 bp	26.1%	27.6%	15.0%	31.3%	46.28%	−0.352	−0.028
12S rRNA12S ribosomal RNA	953 bp	29.1%	21.5%	22.8%	26.7%	49.42%	−0.079	+0.149
16S rRNA16S ribosomal RNA	1,743 bp	32.8%	22.3%	19.7%	25.3%	44.98%	−0.125	+0.191
D-loopControl region (D-loop)	809 bp	30.4%	28.7%	19.3%	21.6%	40.92%	−0.057	+0.029

Codon usage

Counts per codon, darker is more frequent

Gene

3,812 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%

UUU97

UUC137

Leu L17.1%

UUA67

UUG28

CUU101

CUC177

CUA221

CUG56

Ile I7.3%

AUU146

AUC134

Met M4.4%

AUA106

AUG60

Val V5.7%

GUU53

GUC61

GUA81

GUG23

Ser S6.2%

UCU29

UCC89

UCA58

UCG7

AGU12

AGC41

Pro P5.9%

CCU48

CCC100

CCA71

CCG5

Thr T8.3%

ACU59

ACC123

ACA126

ACG8

Ala A8.7%

GCU54

GCC147

GCA120

GCG11

Tyr Y2.9%

UAU31

UAC78

His H2.9%

CAU41

CAC71

Gln Q2.5%

CAA86

CAG10

Asn N3.1%

AAU32

AAC86

Lys K1.9%

AAA68

AAG5

Asp D2.0%

GAU22

GAC54

Glu E2.6%

GAA82

GAG16

Cys C0.7%

UGU7

UGC19

Trp W3.2%

UGA111

UGG10

Arg R2.1%

CGU8

CGC16

CGA47

CGG8

Gly G6.3%

GGU37

GGC76

GGA103

GGG25

Stop 0.2%

UAA5

UAG1

AGA0

AGG1

Genome map

38 annotated features in NC_022484.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Sphyraena barracuda (NC_022484.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,022	953 bp	+	49.4%
tRNA-Val	Transfer RNA	1,023	1,095	73 bp	+	–
16S rRNA	Ribosomal RNA	1,096	2,838	1,743 bp	+	45.0%
tRNA-Leu (UUR)	Transfer RNA	2,954	3,027	74 bp	+	–
ND1	Protein-coding gene	3,028	4,002	975 bp	+	46.9%
tRNA-Ile	Transfer RNA	4,008	4,078	71 bp	+	–
tRNA-Gln	Transfer RNA	4,078	4,148	71 bp	−	–
tRNA-Met	Transfer RNA	4,157	4,225	69 bp	+	–
ND2	Protein-coding gene	4,226	5,275	1,050 bp	+	46.4%
tRNA-Trp	Transfer RNA	5,318	5,388	71 bp	+	–
tRNA-Ala	Transfer RNA	5,392	5,460	69 bp	−	–
tRNA-Asn	Transfer RNA	5,462	5,534	73 bp	−	–
tRNA-Cys	Transfer RNA	5,573	5,638	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,640	5,709	70 bp	−	–
COX1	Protein-coding gene	5,711	7,273	1,563 bp	+	45.9%
tRNA-Ser (UCN)	Transfer RNA	7,262	7,332	71 bp	−	–
tRNA-Asp	Transfer RNA	7,336	7,407	72 bp	+	–
COX2	Protein-coding gene	7,413	8,103	691 bp	+	45.7%
tRNA-Lys	Transfer RNA	8,104	8,178	75 bp	+	–
ATP8	Protein-coding gene	8,184	8,351	168 bp	+	45.2%
ATP6	Protein-coding gene	8,342	9,024	683 bp	+	45.1%
COX3	Protein-coding gene	9,025	9,809	785 bp	+	48.7%
tRNA-Gly	Transfer RNA	9,810	9,880	71 bp	+	–
ND3	Protein-coding gene	9,881	10,229	349 bp	+	47.9%
tRNA-Arg	Transfer RNA	10,230	10,298	69 bp	+	–
ND4L	Protein-coding gene	10,299	10,595	297 bp	+	46.8%
ND4	Protein-coding gene	10,589	11,969	1,381 bp	+	46.1%
tRNA-His	Transfer RNA	11,970	12,038	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	12,039	12,106	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	12,111	12,183	73 bp	+	–
ND5	Protein-coding gene	12,184	14,022	1,839 bp	+	45.6%
ND6	Protein-coding gene	14,019	14,540	522 bp	−	45.6%
tRNA-Glu	Transfer RNA	14,541	14,609	69 bp	−	–
CYTB	Protein-coding gene	14,613	15,753	1,141 bp	+	46.3%
tRNA-Thr	Transfer RNA	15,754	15,826	73 bp	+	–
tRNA-Pro	Transfer RNA	15,826	15,898	73 bp	−	–
D-loop	Control region	15,899	16,707	809 bp	–	40.9%