MitoAge

Spilogale putorius

Eastern spotted skunk

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Maximum lifespan
10.5 yr
AnAge record
mtDNA size
16,597 bp
RefSeq NC_010497.1
GC content
36.50%
Whole genome
Non-coding
1,221 bp
D-loop 1,138 bp

Where Eastern spotted skunk sits among 2,335 species

Whole-genome GC content against maximum lifespan. Eastern spotted skunk has the 1,536th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Eastern spotted skunk
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,597 bp
GC skew (G − C) / (G + C)
−0.280
AT skew (A − T) / (A + T)
+0.077

Life history

Maximum lifespan
10.5 years
Adult weight
600 g
Birth weight
9.5 g
Basal metabolic rate
1.674 W
Body temperature
36.4 °C
Female sexual maturity
152 days
Male sexual maturity
152 days
Gestation or incubation
31 days
Litter or clutch size
5
Litters per year
1.5
Postnatal growth rate
0.0311 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02166)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,597 bp
Protein-coding11,339 bp
12S rRNA954 bp
16S rRNA1,577 bp
All tRNA1,509 bp
D-loop1,138 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.5%31.2%11.7%25.6%37.34%−0.373+0.005
ND2NADH dehydrogenase subunit 21,042 bp37.3%29.8%8.9%23.9%32.82%−0.456+0.111
COX1Cytochrome c oxidase subunit I1,545 bp30.2%31.9%16.4%21.5%37.93%−0.133−0.028
COX2Cytochrome c oxidase subunit II684 bp34.6%31.6%12.9%20.9%33.77%−0.238+0.046
ATP8ATP synthase F0 subunit 8204 bp38.7%31.4%7.4%22.5%29.90%−0.508+0.105
ATP6ATP synthase F0 subunit 6681 bp31.3%31.6%10.9%26.3%37.15%−0.415−0.005
COX3Cytochrome c oxidase subunit III784 bp29.6%31.3%14.7%24.5%39.16%−0.251−0.027
ND3NADH dehydrogenase subunit 3347 bp34.6%30.3%11.0%24.2%35.16%−0.377+0.067
ND4LNADH dehydrogenase subunit 4L297 bp30.0%33.7%13.5%22.9%36.36%−0.259−0.058
ND4NADH dehydrogenase subunit 41,378 bp33.5%30.9%10.1%25.5%35.63%−0.434+0.039
ND5NADH dehydrogenase subunit 51,821 bp34.8%30.3%10.5%24.5%34.98%−0.400+0.069
ND6NADH dehydrogenase subunit 6528 bp42.6%22.7%9.7%25.0%34.66%−0.443+0.304
CYTBCytochrome b1,140 bp30.7%28.5%13.1%27.7%40.79%−0.359+0.037
12S rRNA12S ribosomal RNA954 bp37.3%23.4%17.7%21.6%39.31%−0.099+0.230
16S rRNA16S ribosomal RNA1,577 bp38.7%25.3%16.8%19.2%35.95%−0.065+0.210
D-loopControl region (D-loop)1,138 bp32.3%30.4%13.4%23.8%37.26%−0.278+0.031

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU115
UUC113
Leu L15.7%
UUA196
UUG11
CUU86
CUC48
CUA228
CUG28
Ile I9.0%
AUU195
AUC148
Met M6.7%
AUA217
AUG37
Val V4.7%
GUU42
GUC21
GUA102
GUG15
Ser S7.7%
UCU53
UCC54
UCA123
UCG10
AGU21
AGC32
Pro P5.1%
CCU51
CCC50
CCA85
CCG7
Thr T8.2%
ACU77
ACC77
ACA152
ACG6
Ala A6.3%
GCU77
GCC68
GCA92
GCG3
Tyr Y3.5%
UAU79
UAC53
His H2.5%
CAU57
CAC39
Gln Q2.4%
CAA81
CAG9
Asn N4.3%
AAU79
AAC84
Lys K2.7%
AAA92
AAG10
Asp D1.9%
GAU33
GAC39
Glu E2.4%
GAA79
GAG13
Cys C0.7%
UGU15
UGC11
Trp W2.7%
UGA95
UGG8
Arg R1.7%
CGU5
CGC9
CGA48
CGG2
Gly G5.6%
GGU39
GGC39
GGA108
GGG26
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_010497.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17171 bp+–
12S rRNARibosomal RNA721,025954 bp+39.3%
tRNA-ValTransfer RNA1,0261,09368 bp+–
16S rRNARibosomal RNA1,0942,6701,577 bp+36.0%
tRNA-Leu (UUR)Transfer RNA2,6712,74676 bp+–
ND1Protein-coding gene2,7493,704956 bp+37.3%
tRNA-IleTransfer RNA3,7053,77470 bp+–
tRNA-GlnTransfer RNA3,7713,84272 bp−–
tRNA-MetTransfer RNA3,8443,91269 bp+–
ND2Protein-coding gene3,9134,9541,042 bp+32.8%
tRNA-TrpTransfer RNA4,9555,02268 bp+–
tRNA-AlaTransfer RNA5,0365,10368 bp−–
tRNA-AsnTransfer RNA5,1055,17773 bp−–
tRNA-CysTransfer RNA5,2095,27668 bp−–
tRNA-TyrTransfer RNA5,2795,34567 bp−–
COX1Protein-coding gene5,3476,8911,545 bp+37.9%
tRNA-Ser (UCN)Transfer RNA6,8896,95769 bp−–
tRNA-AspTransfer RNA6,9647,03067 bp+–
COX2Protein-coding gene7,0317,714684 bp+33.8%
tRNA-LysTransfer RNA7,7187,78669 bp+–
ATP8Protein-coding gene7,7887,991204 bp+29.9%
ATP6Protein-coding gene7,9498,629681 bp+37.2%
COX3Protein-coding gene8,6299,412784 bp+39.2%
tRNA-GlyTransfer RNA9,4139,48169 bp+–
ND3Protein-coding gene9,4829,828347 bp+35.2%
tRNA-ArgTransfer RNA9,8299,89769 bp+–
ND4LProtein-coding gene9,89810,194297 bp+36.4%
ND4Protein-coding gene10,18811,5651,378 bp+35.6%
tRNA-HisTransfer RNA11,56611,63469 bp+–
tRNA-Ser (AGY)Transfer RNA11,63511,69359 bp+–
tRNA-Leu (CUN)Transfer RNA11,69411,76370 bp+–
ND5Protein-coding gene11,76413,5841,821 bp+35.0%
ND6Protein-coding gene13,56814,095528 bp−34.7%
tRNA-GluTransfer RNA14,09614,16469 bp−–
CYTBProtein-coding gene14,16915,3081,140 bp+40.8%
tRNA-ThrTransfer RNA15,30915,37567 bp+–
tRNA-ProTransfer RNA15,37515,44167 bp−–
D-loopControl region15,44216,5791,138 bp–37.3%

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