MitoAge

Stenella attenuata

Pantropical spotted dolphin

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Maximum lifespan
46 yr
AnAge record
mtDNA size
16,386 bp
RefSeq NC_012051.1
GC content
38.72%
Whole genome
Non-coding
979 bp
D-loop 915 bp

Where Pantropical spotted dolphin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Pantropical spotted dolphin has the 187th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Pantropical spotted dolphin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,386 bp
GC skew (G − C) / (G + C)
−0.342
AT skew (A − T) / (A + T)
+0.079

Life history

Maximum lifespan
46 years
Adult weight
112.5 kg
Birth weight
10 kg
Female sexual maturity
8.2 years
Male sexual maturity
10.8 years
Gestation or incubation
345 days
Litter or clutch size
1
Litters per year
0.3

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02300)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,386 bp
Protein-coding11,346 bp
12S rRNA974 bp
16S rRNA1,577 bp
All tRNA1,515 bp
D-loop915 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp32.6%26.8%11.3%29.4%40.65%−0.445+0.099
ND2NADH dehydrogenase subunit 21,042 bp35.2%27.8%7.7%29.3%36.95%−0.584+0.117
COX1Cytochrome c oxidase subunit I1,551 bp29.0%31.8%15.9%23.3%39.20%−0.188−0.046
COX2Cytochrome c oxidase subunit II684 bp33.5%27.5%13.6%25.4%39.04%−0.303+0.098
ATP8ATP synthase F0 subunit 8192 bp35.9%26.6%6.3%31.3%37.50%−0.667+0.150
ATP6ATP synthase F0 subunit 6681 bp31.4%30.1%10.1%28.3%38.47%−0.473+0.021
COX3Cytochrome c oxidase subunit III785 bp28.3%29.6%13.1%29.0%42.17%−0.378−0.022
ND3NADH dehydrogenase subunit 3346 bp31.8%30.6%10.1%27.5%37.57%−0.462+0.019
ND4LNADH dehydrogenase subunit 4L297 bp29.6%33.0%12.1%25.3%37.37%−0.351−0.054
ND4NADH dehydrogenase subunit 41,378 bp32.0%29.9%9.9%28.2%38.10%−0.478+0.034
ND5NADH dehydrogenase subunit 51,821 bp32.8%28.4%9.5%29.2%38.72%−0.509+0.072
ND6NADH dehydrogenase subunit 6528 bp43.0%22.0%6.6%28.4%35.04%−0.622+0.324
CYTBCytochrome b1,140 bp30.5%27.6%12.3%29.6%41.84%−0.413+0.050
12S rRNA12S ribosomal RNA974 bp35.9%22.4%18.6%23.1%41.68%−0.108+0.232
16S rRNA16S ribosomal RNA1,577 bp37.0%25.7%17.4%19.9%37.29%−0.068+0.179
D-loopControl region (D-loop)915 bp29.7%32.9%13.7%23.7%37.38%−0.269−0.051

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU102
UUC142
Leu L16.8%
UUA138
UUG12
CUU80
CUC109
CUA285
CUG15
Ile I8.3%
AUU158
AUC158
Met M6.1%
AUA202
AUG31
Val V4.6%
GUU42
GUC41
GUA77
GUG15
Ser S6.8%
UCU58
UCC59
UCA88
UCG2
AGU17
AGC36
Pro P5.3%
CCU61
CCC68
CCA69
CCG3
Thr T8.8%
ACU65
ACC91
ACA172
ACG5
Ala A6.6%
GCU74
GCC77
GCA94
GCG5
Tyr Y3.4%
UAU73
UAC57
His H2.5%
CAU39
CAC57
Gln Q2.5%
CAA89
CAG6
Asn N4.2%
AAU61
AAC98
Lys K2.6%
AAA95
AAG3
Asp D1.8%
GAU23
GAC46
Glu E2.4%
GAA82
GAG10
Cys C0.6%
UGU10
UGC12
Trp W2.7%
UGA98
UGG6
Arg R1.7%
CGU9
CGC15
CGA36
CGG3
Gly G5.6%
GGU44
GGC63
GGA89
GGG15
Stop 0.2%
UAA7
UAG0
AGA2
AGG0

Genome map

38 annotated features in NC_012051.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (38.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17272 bp+–
12S rRNARibosomal RNA731,046974 bp+41.7%
tRNA-ValTransfer RNA1,0471,11367 bp+–
16S rRNARibosomal RNA1,1142,6901,577 bp+37.3%
tRNA-Leu (UUR)Transfer RNA2,6912,76575 bp+–
ND1Protein-coding gene2,7673,723957 bp+40.7%
tRNA-IleTransfer RNA3,7283,79669 bp+–
tRNA-GlnTransfer RNA3,7943,86673 bp−–
tRNA-MetTransfer RNA3,8683,93669 bp+–
ND2Protein-coding gene3,9374,9781,042 bp+37.0%
tRNA-TrpTransfer RNA4,9795,04769 bp+–
tRNA-AlaTransfer RNA5,0535,12169 bp−–
tRNA-AsnTransfer RNA5,1225,19675 bp−–
tRNA-CysTransfer RNA5,2295,29567 bp−–
tRNA-TyrTransfer RNA5,2965,36166 bp−–
COX1Protein-coding gene5,3636,9131,551 bp+39.2%
tRNA-Ser (UCN)Transfer RNA6,9096,97769 bp−–
tRNA-AspTransfer RNA6,9857,05268 bp+–
COX2Protein-coding gene7,0537,736684 bp+39.0%
tRNA-LysTransfer RNA7,7407,80465 bp+–
ATP8Protein-coding gene7,8098,000192 bp+37.5%
ATP6Protein-coding gene7,9708,650681 bp+38.5%
COX3Protein-coding gene8,6509,434785 bp+42.2%
tRNA-GlyTransfer RNA9,4359,50369 bp+–
ND3Protein-coding gene9,5049,849346 bp+37.6%
tRNA-ArgTransfer RNA9,8519,92070 bp+–
ND4LProtein-coding gene9,92110,217297 bp+37.4%
ND4Protein-coding gene10,21111,5881,378 bp+38.1%
tRNA-HisTransfer RNA11,58911,65769 bp+–
tRNA-Ser (AGY)Transfer RNA11,65811,71861 bp+–
tRNA-Leu (CUN)Transfer RNA11,72011,78970 bp+–
ND5Protein-coding gene11,79013,6101,821 bp+38.7%
ND6Protein-coding gene13,59414,121528 bp−35.0%
tRNA-GluTransfer RNA14,12214,19069 bp+–
CYTBProtein-coding gene14,19515,3341,140 bp+41.8%
tRNA-ThrTransfer RNA15,33515,40571 bp+–
tRNA-ProTransfer RNA15,40515,47167 bp+–
D-loopControl region15,47216,386915 bp–37.4%

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