Taractichthys steindachneri
Sickle pomfret
GC content
47.38%
Whole genome
Non-coding
1,126 bp
D-loop 1,069 bp
Where Sickle pomfret sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sickle pomfret has the 1,773rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,723 bp
- GC skew (G − C) / (G + C)
- −0.320
- AT skew (A − T) / (A + T)
- +0.036
Life history
- Maximum lifespan
- 8 years
- Adult weight
- 6.1 kg
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04107)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,723 bp
Protein-coding11,411 bp
12S rRNA951 bp
16S rRNA1,689 bp
All tRNA1,550 bp
D-loop1,069 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 49.95% | −0.396 | −0.037 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 50.33% | −0.529 | +0.035 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.20% | −0.240 | −0.043 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.43% | −0.342 | +0.010 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.513 | +0.200 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.52% | −0.446 | −0.053 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 48.98% | −0.309 | −0.037 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 51.85% | −0.363 | −0.148 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.52% | −0.386 | −0.139 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.88% | −0.419 | +0.031 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.77% | −0.453 | +0.019 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 52.11% | −0.426 | +0.416 | |||||
| CYTBCytochrome b | 1,141 bp | 47.77% | −0.417 | −0.054 | |||||
| 12S rRNA12S ribosomal RNA | 951 bp | 48.58% | −0.130 | +0.170 | |||||
| 16S rRNA16S ribosomal RNA | 1,689 bp | 46.66% | −0.132 | +0.214 | |||||
| D-loopControl region (D-loop) | 1,069 bp | 38.17% | −0.167 | −0.129 |
Codon usage
Counts per codon, darker is more frequent3,810 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU101
UUC136
Leu L17.5%
UUA58
UUG15
CUU137
CUC215
CUA188
CUG54
Ile I7.2%
AUU124
AUC152
Met M4.2%
AUA113
AUG47
Val V5.4%
GUU52
GUC67
GUA65
GUG20
Ser S6.4%
UCU31
UCC90
UCA63
UCG7
AGU9
AGC43
Pro P6.0%
CCU45
CCC134
CCA40
CCG10
Thr T8.0%
ACU35
ACC147
ACA110
ACG14
Ala A9.0%
GCU59
GCC175
GCA99
GCG9
Tyr Y2.8%
UAU33
UAC74
His H2.7%
CAU22
CAC81
Gln Q2.4%
CAA83
CAG10
Asn N3.2%
AAU30
AAC91
Lys K1.9%
AAA58
AAG15
Asp D2.0%
GAU17
GAC60
Glu E2.7%
GAA79
GAG22
Cys C0.7%
UGU4
UGC22
Trp W3.1%
UGA95
UGG23
Arg R2.0%
CGU8
CGC17
CGA42
CGG8
Gly G6.4%
GGU30
GGC81
GGA84
GGG47
Stop 0.3%
UAA9
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_027858.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,019 | 951 bp | + | 48.6% |
| tRNA-Val | Transfer RNA | 1,020 | 1,090 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,779 | 1,689 bp | + | 46.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,780 | 2,854 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 50.0% |
| tRNA-Ile | Transfer RNA | 3,834 | 3,904 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,904 | 3,973 | 70 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,041 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,042 | 5,088 | 1,047 bp | + | 50.3% |
| tRNA-Ala | Transfer RNA | 5,088 | 5,158 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,160 | 5,228 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,230 | 5,302 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,338 | 5,404 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,405 | 5,471 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,473 | 7,023 | 1,551 bp | + | 47.2% |
| tRNA-Ser (UCN) | Transfer RNA | 7,024 | 7,095 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,099 | 7,171 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,176 | 7,866 | 691 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,867 | 7,940 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,942 | 8,109 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,100 | 8,783 | 684 bp | + | 47.5% |
| COX3 | Protein-coding gene | 8,783 | 9,568 | 786 bp | + | 49.0% |
| tRNA-Gly | Transfer RNA | 9,568 | 9,639 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,640 | 9,990 | 351 bp | + | 51.9% |
| tRNA-Arg | Transfer RNA | 9,989 | 10,057 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,058 | 10,354 | 297 bp | + | 51.5% |
| ND4 | Protein-coding gene | 10,348 | 11,728 | 1,381 bp | + | 48.9% |
| tRNA-His | Transfer RNA | 11,729 | 11,798 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,798 | 11,866 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,870 | 11,942 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,943 | 13,781 | 1,839 bp | + | 46.8% |
| ND6 | Protein-coding gene | 13,778 | 14,299 | 522 bp | − | 52.1% |
| tRNA-Gln | Transfer RNA | 14,300 | 14,368 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,373 | 15,513 | 1,141 bp | + | 47.8% |
| tRNA-Thr | Transfer RNA | 15,514 | 15,585 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,585 | 15,654 | 70 bp | − | – |
| D-loop | Control region | 15,655 | 16,723 | 1,069 bp | – | 38.2% |