Terapon jarbua
Jarbua terapon
GC content
46.44%
Whole genome
Non-coding
948 bp
D-loop 839 bp
Where Jarbua terapon sits among 2,335 species
Whole-genome GC content against maximum lifespan. Jarbua terapon has the 1,752nd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,570 bp
- GC skew (G − C) / (G + C)
- −0.287
- AT skew (A − T) / (A + T)
- +0.022
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,570 bp
Protein-coding11,412 bp
12S rRNA954 bp
16S rRNA1,700 bp
All tRNA1,556 bp
D-loop839 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.77% | −0.373 | −0.083 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 48.76% | −0.490 | +0.007 | |||||
| COX1Cytochrome c oxidase subunit I | 1,557 bp | 46.50% | −0.199 | −0.092 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.13% | −0.282 | −0.008 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.487 | +0.111 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.08% | −0.435 | −0.099 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 48.72% | −0.277 | −0.109 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.56% | −0.337 | −0.169 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.19% | −0.471 | −0.141 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.01% | −0.360 | −0.020 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.71% | −0.390 | +0.002 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.32% | −0.336 | +0.375 | |||||
| CYTBCytochrome b | 1,141 bp | 46.71% | −0.377 | −0.076 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 48.43% | −0.082 | +0.175 | |||||
| 16S rRNA16S ribosomal RNA | 1,700 bp | 46.88% | −0.102 | +0.218 | |||||
| D-loopControl region (D-loop) | 839 bp | 35.88% | −0.229 | +0.015 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU77
UUC160
Leu L17.7%
UUA81
UUG12
CUU172
CUC192
CUA162
CUG54
Ile I6.9%
AUU142
AUC121
Met M3.8%
AUA69
AUG75
Val V6.0%
GUU63
GUC72
GUA70
GUG25
Ser S6.4%
UCU50
UCC75
UCA54
UCG8
AGU12
AGC44
Pro P5.9%
CCU66
CCC91
CCA60
CCG8
Thr T8.0%
ACU50
ACC113
ACA121
ACG19
Ala A9.2%
GCU63
GCC163
GCA115
GCG10
Tyr Y2.9%
UAU36
UAC75
His H2.8%
CAU31
CAC76
Gln Q2.5%
CAA81
CAG13
Asn N3.0%
AAU40
AAC76
Lys K1.9%
AAA68
AAG5
Asp D1.9%
GAU20
GAC53
Glu E2.7%
GAA86
GAG16
Cys C0.7%
UGU9
UGC17
Trp W3.2%
UGA102
UGG18
Arg R1.9%
CGU13
CGC11
CGA43
CGG7
Gly G6.2%
GGU43
GGC88
GGA63
GGG43
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_027281.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,022 | 954 bp | + | 48.4% |
| tRNA-Val | Transfer RNA | 1,023 | 1,094 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,095 | 2,794 | 1,700 bp | + | 46.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,795 | 2,868 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,869 | 3,843 | 975 bp | + | 46.8% |
| tRNA-Ile | Transfer RNA | 3,845 | 3,914 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,953 | 4,023 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,032 | 4,100 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,101 | 5,146 | 1,046 bp | + | 48.8% |
| tRNA-Trp | Transfer RNA | 5,147 | 5,217 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,219 | 5,287 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,289 | 5,361 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,400 | 5,465 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,466 | 5,536 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,538 | 7,094 | 1,557 bp | + | 46.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,095 | 7,165 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,169 | 7,240 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,249 | 7,939 | 691 bp | + | 43.1% |
| tRNA-Lys | Transfer RNA | 7,940 | 8,013 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 8,015 | 8,182 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,173 | 8,856 | 684 bp | + | 47.1% |
| COX3 | Protein-coding gene | 8,856 | 9,639 | 784 bp | + | 48.7% |
| tRNA-Gly | Transfer RNA | 9,640 | 9,711 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,712 | 10,060 | 349 bp | + | 47.6% |
| tRNA-Arg | Transfer RNA | 10,061 | 10,129 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,130 | 10,426 | 297 bp | + | 52.2% |
| ND4 | Protein-coding gene | 10,420 | 11,800 | 1,381 bp | + | 48.0% |
| tRNA-His | Transfer RNA | 11,801 | 11,869 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,870 | 11,937 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,942 | 12,014 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,015 | 13,853 | 1,839 bp | + | 46.7% |
| ND6 | Protein-coding gene | 13,850 | 14,371 | 522 bp | − | 47.3% |
| tRNA-Glu | Transfer RNA | 14,372 | 14,440 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,446 | 15,586 | 1,141 bp | + | 46.7% |
| tRNA-Thr | Transfer RNA | 15,587 | 15,659 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,660 | 15,731 | 72 bp | − | – |
| D-loop | Control region | 15,732 | 16,570 | 839 bp | – | 35.9% |