Thymallus baicalensis
Baikal black grayling
GC content
44.59%
Whole genome
Non-coding
1,072 bp
D-loop 1,004 bp
Where Baikal black grayling sits among 2,335 species
Whole-genome GC content against maximum lifespan. Baikal black grayling has the 1,524th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,662 bp
- GC skew (G − C) / (G + C)
- −0.233
- AT skew (A − T) / (A + T)
- +0.016
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,662 bp
Protein-coding11,409 bp
12S rRNA947 bp
16S rRNA1,679 bp
All tRNA1,555 bp
D-loop1,004 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.36% | −0.279 | −0.094 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,048 bp | 43.61% | −0.374 | −0.012 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.62% | −0.182 | −0.127 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.71% | −0.252 | −0.044 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 47.62% | −0.400 | +0.068 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 42.61% | −0.381 | −0.082 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.61% | −0.257 | −0.091 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 43.84% | −0.307 | −0.122 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.82% | −0.241 | −0.092 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 42.72% | −0.288 | −0.029 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 42.69% | −0.340 | −0.002 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.47% | −0.431 | +0.465 | |||||
| CYTBCytochrome b | 1,141 bp | 44.44% | −0.306 | −0.047 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 50.16% | −0.086 | +0.195 | |||||
| 16S rRNA16S ribosomal RNA | 1,679 bp | 47.77% | −0.050 | +0.241 | |||||
| D-loopControl region (D-loop) | 1,004 bp | 34.66% | −0.167 | −0.009 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU132
UUC96
Leu L17.4%
UUA114
UUG29
CUU198
CUC101
CUA177
CUG42
Ile I6.7%
AUU156
AUC100
Met M4.1%
AUA97
AUG58
Val V6.2%
GUU70
GUC48
GUA85
GUG34
Ser S6.2%
UCU57
UCC59
UCA58
UCG7
AGU11
AGC45
Pro P5.6%
CCU55
CCC74
CCA78
CCG7
Thr T8.1%
ACU64
ACC120
ACA112
ACG13
Ala A9.2%
GCU83
GCC145
GCA107
GCG14
Tyr Y2.9%
UAU55
UAC55
His H2.7%
CAU22
CAC82
Gln Q2.6%
CAA79
CAG20
Asn N3.0%
AAU51
AAC63
Lys K2.0%
AAA63
AAG13
Asp D2.0%
GAU29
GAC48
Glu E2.8%
GAA77
GAG28
Cys C0.7%
UGU9
UGC18
Trp W3.2%
UGA103
UGG19
Arg R2.0%
CGU10
CGC10
CGA46
CGG10
Gly G6.4%
GGU52
GGC54
GGA90
GGG49
Stop 0.2%
UAA5
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_056306.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 50.2% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,766 | 1,679 bp | + | 47.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,767 | 2,841 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,842 | 3,816 | 975 bp | + | 46.4% |
| tRNA-Ile | Transfer RNA | 3,825 | 3,896 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,894 | 3,964 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,964 | 4,032 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,033 | 5,080 | 1,048 bp | + | 43.6% |
| tRNA-Trp | Transfer RNA | 5,081 | 5,152 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,154 | 5,222 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,224 | 5,296 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,330 | 5,396 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,397 | 5,467 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,469 | 7,019 | 1,551 bp | + | 44.6% |
| tRNA-Ser (UCN) | Transfer RNA | 7,020 | 7,090 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,095 | 7,168 | 74 bp | + | – |
| COX2 | Protein-coding gene | 7,183 | 7,873 | 691 bp | + | 43.7% |
| tRNA-Lys | Transfer RNA | 7,874 | 7,947 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,949 | 8,116 | 168 bp | + | 47.6% |
| ATP6 | Protein-coding gene | 8,107 | 8,789 | 683 bp | + | 42.6% |
| COX3 | Protein-coding gene | 8,790 | 9,574 | 785 bp | + | 45.6% |
| tRNA-Gly | Transfer RNA | 9,575 | 9,644 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,645 | 9,993 | 349 bp | + | 43.8% |
| tRNA-Arg | Transfer RNA | 9,994 | 10,063 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,064 | 10,360 | 297 bp | + | 48.8% |
| ND4 | Protein-coding gene | 10,354 | 11,734 | 1,381 bp | + | 42.7% |
| tRNA-His | Transfer RNA | 11,735 | 11,803 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,804 | 11,872 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,874 | 11,946 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,947 | 13,785 | 1,839 bp | + | 42.7% |
| ND6 | Protein-coding gene | 13,782 | 14,303 | 522 bp | − | 48.5% |
| tRNA-Glu | Transfer RNA | 14,304 | 14,372 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,377 | 15,517 | 1,141 bp | + | 44.4% |
| tRNA-Thr | Transfer RNA | 15,518 | 15,589 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,589 | 15,658 | 70 bp | − | – |
| D-loop | Control region | 15,659 | 16,662 | 1,004 bp | – | 34.7% |