Triglops forficatus
Scissortail sculpin
GC content
48.01%
Whole genome
Non-coding
1,265 bp
Including the D-loop
Where Scissortail sculpin sits among 2,335 species
Whole-genome GC content against maximum lifespan. Scissortail sculpin has the 1,948th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,861 bp
- GC skew (G − C) / (G + C)
- −0.257
- AT skew (A − T) / (A + T)
- +0.006
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,861 bp
Protein-coding11,407 bp
12S rRNA945 bp
16S rRNA1,691 bp
All tRNA1,553 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 51.28% | −0.296 | −0.128 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 51.34% | −0.419 | −0.026 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.87% | −0.216 | −0.110 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.60% | −0.273 | −0.008 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 50.00% | −0.357 | +0.143 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 50.88% | −0.402 | −0.119 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.43% | −0.242 | −0.103 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 54.16% | −0.291 | −0.200 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.325 | −0.133 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.73% | −0.299 | −0.099 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.51% | −0.372 | +0.005 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.38% | −0.346 | +0.421 | |||||
| CYTBCytochrome b | 1,141 bp | 48.99% | −0.377 | −0.076 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 48.25% | −0.075 | +0.219 | |||||
| 16S rRNA16S ribosomal RNA | 1,691 bp | 47.13% | −0.089 | +0.181 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU109
UUC123
Leu L17.3%
UUA64
UUG31
CUU150
CUC178
CUA152
CUG83
Ile I6.8%
AUU127
AUC130
Met M3.9%
AUA75
AUG73
Val V6.1%
GUU58
GUC75
GUA71
GUG30
Ser S6.6%
UCU50
UCC82
UCA43
UCG13
AGU15
AGC47
Pro P5.7%
CCU42
CCC122
CCA36
CCG17
Thr T8.2%
ACU51
ACC155
ACA98
ACG9
Ala A9.2%
GCU70
GCC185
GCA89
GCG7
Tyr Y2.8%
UAU32
UAC75
His H2.8%
CAU28
CAC78
Gln Q2.6%
CAA80
CAG19
Asn N2.9%
AAU26
AAC83
Lys K1.9%
AAA52
AAG19
Asp D2.0%
GAU22
GAC53
Glu E2.6%
GAA56
GAG43
Cys C0.7%
UGU7
UGC18
Trp W3.2%
UGA84
UGG36
Arg R2.1%
CGU9
CGC22
CGA33
CGG15
Gly G6.6%
GGU27
GGC98
GGA57
GGG68
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
37 annotated features in NC_082794.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,013 | 945 bp | + | 48.3% |
| tRNA-Val | Transfer RNA | 1,014 | 1,086 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,777 | 1,691 bp | + | 47.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,778 | 2,851 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,852 | 3,826 | 975 bp | + | 51.3% |
| tRNA-Ile | Transfer RNA | 3,831 | 3,900 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,900 | 3,970 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,970 | 4,038 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,039 | 5,084 | 1,046 bp | + | 51.3% |
| tRNA-Trp | Transfer RNA | 5,085 | 5,155 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,157 | 5,225 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,227 | 5,299 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,337 | 5,402 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,403 | 5,473 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,475 | 7,025 | 1,551 bp | + | 48.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,026 | 7,096 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,100 | 7,172 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,180 | 7,870 | 691 bp | + | 46.6% |
| tRNA-Lys | Transfer RNA | 7,871 | 7,944 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,946 | 8,113 | 168 bp | + | 50.0% |
| ATP6 | Protein-coding gene | 8,104 | 8,787 | 684 bp | + | 50.9% |
| COX3 | Protein-coding gene | 8,787 | 9,571 | 785 bp | + | 49.4% |
| tRNA-Gly | Transfer RNA | 9,572 | 9,644 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,645 | 9,993 | 349 bp | + | 54.2% |
| tRNA-Arg | Transfer RNA | 9,994 | 10,062 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,063 | 10,359 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,353 | 11,733 | 1,381 bp | + | 48.7% |
| tRNA-His | Transfer RNA | 11,734 | 11,802 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,803 | 11,870 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,875 | 11,947 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,948 | 13,786 | 1,839 bp | + | 48.5% |
| ND6 | Protein-coding gene | 13,783 | 14,304 | 522 bp | − | 50.4% |
| tRNA-Glu | Transfer RNA | 14,305 | 14,373 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,378 | 15,518 | 1,141 bp | + | 49.0% |
| tRNA-Thr | Transfer RNA | 15,519 | 15,590 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,590 | 15,659 | 70 bp | − | – |