MitoAge

Trimeresurus albolabris

White-lipped tree viper

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Maximum lifespan
11.4 yr
AnAge record
mtDNA size
17,220 bp
RefSeq NC_022820.1
GC content
39.56%
Whole genome
Non-coding
2,133 bp
D-loop 2,093 bp

Where White-lipped tree viper sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-lipped tree viper has the 1,475th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %White-lipped tree viper
  • This species
  • Other reptiles
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,220 bp
GC skew (G − C) / (G + C)
−0.379
AT skew (A − T) / (A + T)
+0.105

Life history

Maximum lifespan
11.4 years
Adult weight
414.5 g

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03654)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,220 bp
Protein-coding11,284 bp
12S rRNA907 bp
16S rRNA1,478 bp
All tRNA1,429 bp
D-loop2,093 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1961 bp32.2%27.0%10.7%30.2%40.90%−0.476+0.088
ND2NADH dehydrogenase subunit 21,030 bp36.9%24.4%8.4%30.3%38.74%−0.564+0.204
COX1Cytochrome c oxidase subunit I1,602 bp29.0%28.4%15.3%27.3%42.63%−0.283+0.010
COX2Cytochrome c oxidase subunit II685 bp31.8%22.8%15.6%29.8%45.40%−0.312+0.166
ATP8ATP synthase F0 subunit 8165 bp40.0%26.7%7.9%25.5%33.33%−0.527+0.200
ATP6ATP synthase F0 subunit 6681 bp33.3%27.9%8.7%30.1%38.77%−0.553+0.089
COX3Cytochrome c oxidase subunit III784 bp30.7%26.9%15.6%26.8%42.35%−0.265+0.066
ND3NADH dehydrogenase subunit 3343 bp33.2%26.8%10.8%29.2%39.94%−0.460+0.107
ND4LNADH dehydrogenase subunit 4L291 bp32.6%30.2%11.0%26.1%37.11%−0.407+0.038
ND4NADH dehydrogenase subunit 41,338 bp34.7%26.2%9.6%29.6%39.16%−0.511+0.140
ND5NADH dehydrogenase subunit 51,788 bp35.5%28.5%9.0%27.1%36.07%−0.501+0.109
ND6NADH dehydrogenase subunit 6519 bp46.4%16.0%6.2%31.4%37.57%−0.672+0.488
CYTBCytochrome b1,114 bp30.4%29.7%10.0%29.9%39.86%−0.500+0.012
12S rRNA12S ribosomal RNA907 bp37.2%20.9%16.9%25.0%41.90%−0.195+0.279
16S rRNA16S ribosomal RNA1,478 bp38.4%23.0%16.0%22.7%38.63%−0.173+0.250
D-loopControl region (D-loop)2,093 bp27.5%35.5%11.6%25.4%36.98%−0.372−0.128

Codon usage

Counts per codon, darker is more frequent

3,765 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU105
UUC109
Leu L15.5%
UUA94
UUG14
CUU97
CUC77
CUA274
CUG29
Ile I8.9%
AUU160
AUC174
Met M6.6%
AUA224
AUG26
Val V4.4%
GUU47
GUC36
GUA65
GUG17
Ser S7.1%
UCU43
UCC70
UCA103
UCG7
AGU17
AGC28
Pro P5.4%
CCU32
CCC66
CCA102
CCG4
Thr T11.1%
ACU77
ACC150
ACA180
ACG12
Ala A5.9%
GCU39
GCC75
GCA104
GCG6
Tyr Y3.1%
UAU49
UAC66
His H2.6%
CAU33
CAC65
Gln Q2.4%
CAA80
CAG12
Asn N3.9%
AAU55
AAC93
Lys K2.7%
AAA94
AAG9
Asp D1.5%
GAU23
GAC34
Glu E2.7%
GAA85
GAG15
Cys C0.8%
UGU17
UGC12
Trp W2.5%
UGA85
UGG11
Arg R1.6%
CGU11
CGC2
CGA43
CGG4
Gly G5.2%
GGU29
GGC64
GGA75
GGG29
Stop 0.2%
UAA4
UAG0
AGA3
AGG0

Genome map

39 annotated features in NC_022820.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16565 bp+–
12S rRNARibosomal RNA66972907 bp+41.9%
tRNA-ValTransfer RNA9731,03664 bp+–
16S rRNARibosomal RNA1,0372,5141,478 bp+38.6%
ND1Protein-coding gene2,5153,475961 bp+40.9%
tRNA-IleTransfer RNA3,4763,54267 bp+–
tRNA-ProTransfer RNA3,5483,61063 bp−–
D-loopControl region3,6114,6381,028 bp–37.0%
tRNA-Leu (UUR)Transfer RNA4,6394,71173 bp+–
tRNA-GlnTransfer RNA4,7124,78170 bp−–
tRNA-MetTransfer RNA4,7824,84463 bp+–
ND2Protein-coding gene4,8455,8741,030 bp+38.7%
tRNA-TrpTransfer RNA5,8755,94268 bp+–
tRNA-AlaTransfer RNA5,9436,00664 bp−–
tRNA-AsnTransfer RNA6,0076,07973 bp−–
tRNA-CysTransfer RNA6,1146,17360 bp−–
tRNA-TyrTransfer RNA6,1746,23663 bp−–
COX1Protein-coding gene6,2387,8391,602 bp+42.6%
tRNA-Ser (UCN)Transfer RNA7,8307,89768 bp−–
tRNA-AspTransfer RNA7,8987,95962 bp+–
COX2Protein-coding gene7,9608,644685 bp+45.4%
tRNA-LysTransfer RNA8,6458,70662 bp+–
ATP8Protein-coding gene8,7078,871165 bp+33.3%
ATP6Protein-coding gene8,8629,542681 bp+38.8%
COX3Protein-coding gene9,54210,325784 bp+42.4%
tRNA-GlyTransfer RNA10,32610,38661 bp+–
ND3Protein-coding gene10,38710,729343 bp+39.9%
tRNA-ArgTransfer RNA10,73010,79364 bp+–
ND4LProtein-coding gene10,79411,084291 bp+37.1%
ND4Protein-coding gene11,08412,4211,338 bp+39.2%
tRNA-HisTransfer RNA12,42212,48261 bp+–
tRNA-Ser (AGY)Transfer RNA12,48312,53755 bp+–
tRNA-Leu (CUN)Transfer RNA12,53812,60972 bp+–
ND5Protein-coding gene12,61014,3971,788 bp+36.1%
ND6Protein-coding gene14,39314,911519 bp−37.6%
tRNA-GluTransfer RNA14,91214,97564 bp−–
CYTBProtein-coding gene14,97516,0881,114 bp+39.9%
tRNA-ThrTransfer RNA16,08916,15567 bp+–
D-loopControl region16,15617,2201,065 bp–37.0%

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