Triso dermopterus
Oval grouper
GC content
46.06%
Whole genome
Non-coding
973 bp
D-loop 901 bp
Where Oval grouper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Oval grouper has the 1,369th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,605 bp
- GC skew (G − C) / (G + C)
- −0.275
- AT skew (A − T) / (A + T)
- +0.047
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,605 bp
Protein-coding11,407 bp
12S rRNA954 bp
16S rRNA1,708 bp
All tRNA1,563 bp
D-loop901 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.82% | −0.378 | −0.018 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 48.28% | −0.469 | +0.068 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.58% | −0.176 | −0.095 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.57% | −0.305 | +0.044 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 50.60% | −0.200 | −0.084 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.64% | −0.367 | +0.008 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.86% | −0.278 | −0.031 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.57% | −0.341 | −0.216 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.333 | −0.143 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.92% | −0.349 | +0.001 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.31% | −0.398 | +0.028 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.19% | −0.336 | +0.438 | |||||
| CYTBCytochrome b | 1,141 bp | 47.77% | −0.358 | −0.054 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 48.74% | −0.097 | +0.162 | |||||
| 16S rRNA16S ribosomal RNA | 1,708 bp | 44.44% | −0.101 | +0.220 | |||||
| D-loopControl region (D-loop) | 901 bp | 30.30% | −0.216 | +0.061 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU96
UUC136
Leu L17.6%
UUA93
UUG23
CUU130
CUC165
CUA198
CUG61
Ile I6.8%
AUU129
AUC129
Met M3.8%
AUA88
AUG57
Val V5.8%
GUU62
GUC55
GUA80
GUG25
Ser S6.3%
UCU39
UCC77
UCA63
UCG9
AGU9
AGC42
Pro P5.8%
CCU34
CCC127
CCA51
CCG8
Thr T8.1%
ACU45
ACC118
ACA128
ACG18
Ala A9.2%
GCU53
GCC167
GCA115
GCG15
Tyr Y3.0%
UAU42
UAC72
His H2.8%
CAU21
CAC84
Gln Q2.4%
CAA74
CAG19
Asn N3.1%
AAU32
AAC86
Lys K2.0%
AAA66
AAG12
Asp D2.1%
GAU27
GAC53
Glu E2.6%
GAA71
GAG28
Cys C0.7%
UGU10
UGC18
Trp W3.1%
UGA95
UGG23
Arg R2.1%
CGU13
CGC15
CGA43
CGG8
Gly G6.4%
GGU30
GGC89
GGA58
GGG66
Stop 0.2%
UAA4
UAG3
AGA0
AGG0
Genome map
38 annotated features in NC_022140.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,024 | 954 bp | + | 48.7% |
| tRNA-Val | Transfer RNA | 1,025 | 1,094 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,096 | 2,803 | 1,708 bp | + | 44.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,804 | 2,879 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,880 | 3,854 | 975 bp | + | 48.8% |
| tRNA-Ile | Transfer RNA | 3,859 | 3,928 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,927 | 3,997 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,998 | 4,066 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,067 | 5,112 | 1,046 bp | + | 48.3% |
| tRNA-Trp | Transfer RNA | 5,113 | 5,184 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,186 | 5,254 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,253 | 5,327 | 75 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,370 | 5,436 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,437 | 5,507 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,509 | 7,059 | 1,551 bp | + | 47.6% |
| tRNA-Ser (UCN) | Transfer RNA | 7,061 | 7,131 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,135 | 7,207 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,216 | 7,906 | 691 bp | + | 44.6% |
| tRNA-Lys | Transfer RNA | 7,907 | 7,980 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,982 | 8,149 | 168 bp | + | 50.6% |
| ATP6 | Protein-coding gene | 8,140 | 8,823 | 684 bp | + | 46.6% |
| COX3 | Protein-coding gene | 8,823 | 9,607 | 785 bp | + | 45.9% |
| tRNA-Gly | Transfer RNA | 9,608 | 9,679 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,680 | 10,028 | 349 bp | + | 49.6% |
| tRNA-Arg | Transfer RNA | 10,029 | 10,097 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,098 | 10,394 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,388 | 11,768 | 1,381 bp | + | 46.9% |
| tRNA-His | Transfer RNA | 11,769 | 11,838 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,839 | 11,912 | 74 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,917 | 11,989 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,990 | 13,828 | 1,839 bp | + | 47.3% |
| ND6 | Protein-coding gene | 13,825 | 14,346 | 522 bp | − | 50.2% |
| tRNA-Glu | Transfer RNA | 14,347 | 14,415 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,422 | 15,562 | 1,141 bp | + | 47.8% |
| tRNA-Thr | Transfer RNA | 15,563 | 15,635 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,635 | 15,704 | 70 bp | − | – |
| D-loop | Control region | 15,705 | 16,605 | 901 bp | – | 30.3% |