Tropidophis haetianus

Haitian dwarf boa

Maximum lifespan

15.3 yr

AnAge record

mtDNA size

17,138 bp

RefSeq NC_012573.1

GC content

38.66%

Whole genome

Non-coding

2,004 bp

D-loop 1,842 bp

Where Haitian dwarf boa sits among 2,335 species

Whole-genome GC content against maximum lifespan. Haitian dwarf boa has the 1,198th longest lifespan of them.

This species
Other reptiles
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,138 bp

GC skew (G − C) / (G + C): −0.330
AT skew (A − T) / (A + T): +0.132

Life history

Maximum lifespan: 15.3 years

Lifespan from AnAge · AnAge record

About this record

Lifespan source: AnAge build 15
Based on: an animal in captivity
Data quality: acceptable, tiny sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Updated in build 2
In the database since: build 1 (2015-07-01)
Last changed: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome17,138 bp

Protein-coding11,273 bp

12S rRNA922 bp

16S rRNA1,512 bp

All tRNA1,432 bp

D-loop1,842 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Tropidophis haetianus genes

ND1NADH dehydrogenase subunit 1	964 bp	33.5%	26.5%	12.4%	27.6%	40.04%	−0.378	+0.118
ND2NADH dehydrogenase subunit 2	1,030 bp	39.3%	25.3%	8.7%	26.6%	35.34%	−0.505	+0.216
COX1Cytochrome c oxidase subunit I	1,572 bp	31.0%	28.4%	15.0%	25.4%	40.54%	−0.258	+0.044
COX2Cytochrome c oxidase subunit II	690 bp	33.2%	23.5%	16.2%	27.1%	43.33%	−0.251	+0.171
ATP8ATP synthase F0 subunit 8	161 bp	45.3%	28.0%	8.7%	18.0%	26.71%	−0.349	+0.237
ATP6ATP synthase F0 subunit 6	681 bp	33.2%	26.9%	11.6%	28.3%	39.94%	−0.419	+0.105
COX3Cytochrome c oxidase subunit III	784 bp	31.8%	27.0%	14.4%	26.8%	41.20%	−0.300	+0.080
ND3NADH dehydrogenase subunit 3	343 bp	32.7%	28.6%	12.2%	26.5%	38.78%	−0.368	+0.067
ND4LNADH dehydrogenase subunit 4L	291 bp	38.5%	24.7%	11.3%	25.4%	36.77%	−0.383	+0.217
ND4NADH dehydrogenase subunit 4	1,356 bp	33.9%	25.3%	11.2%	29.6%	40.78%	−0.450	+0.146
ND5NADH dehydrogenase subunit 5	1,791 bp	37.2%	26.0%	10.0%	26.8%	36.80%	−0.457	+0.177
ND6NADH dehydrogenase subunit 6	504 bp	46.4%	20.2%	7.1%	26.2%	33.33%	−0.571	+0.393
CYTBCytochrome b	1,113 bp	33.0%	30.1%	11.1%	25.8%	36.93%	−0.397	+0.046
12S rRNA12S ribosomal RNA	922 bp	36.4%	21.0%	18.5%	24.0%	42.52%	−0.128	+0.268
16S rRNA16S ribosomal RNA	1,512 bp	39.2%	21.9%	16.6%	22.4%	38.96%	−0.148	+0.283
D-loopControl region (D-loop)	1,842 bp	29.3%	34.4%	11.6%	24.8%	36.32%	−0.363	−0.079

Codon usage

Counts per codon, darker is more frequent

Gene

3,755 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.4%

UUU112

UUC92

Leu L15.3%

UUA103

UUG18

CUU84

CUC51

CUA297

CUG23

Ile I7.8%

AUU154

AUC140

Met M7.8%

AUA245

AUG47

Val V4.5%

GUU32

GUC30

GUA93

GUG13

Ser S7.0%

UCU33

UCC46

UCA129

UCG5

AGU12

AGC36

Pro P5.4%

CCU22

CCC21

CCA151

CCG8

Thr T10.5%

ACU86

ACC87

ACA216

ACG6

Ala A7.0%

GCU51

GCC95

GCA108

GCG8

Tyr Y2.6%

UAU42

UAC54

His H2.6%

CAU37

CAC60

Gln Q2.8%

CAA93

CAG11

Asn N4.1%

AAU69

AAC86

Lys K3.0%

AAA94

AAG17

Asp D1.5%

GAU21

GAC37

Glu E2.4%

GAA70

GAG20

Cys C0.9%

UGU15

UGC17

Trp W2.5%

UGA81

UGG13

Arg R1.7%

CGU6

CGC12

CGA40

CGG5

Gly G5.1%

GGU30

GGC70

GGA68

GGG25

Stop 0.2%

UAA4

UAG1

AGA2

AGG1

Genome map

39 annotated features in NC_012573.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop2

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (38.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 39 features as a table

Annotated features of Tropidophis haetianus (NC_012573.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	67	67 bp	+	–
12S rRNA	Ribosomal RNA	68	989	922 bp	+	42.5%
tRNA-Val	Transfer RNA	990	1,052	63 bp	+	–
16S rRNA	Ribosomal RNA	1,053	2,564	1,512 bp	+	39.0%
ND1	Protein-coding gene	2,565	3,528	964 bp	+	40.0%
tRNA-Ile	Transfer RNA	3,529	3,594	66 bp	+	–
D-loop	Control region	3,595	4,499	905 bp	–	36.3%
tRNA-Leu (UUR)	Transfer RNA	4,500	4,572	73 bp	+	–
tRNA-Gln	Transfer RNA	4,573	4,645	73 bp	−	–
tRNA-Met	Transfer RNA	4,649	4,711	63 bp	+	–
ND2	Protein-coding gene	4,712	5,741	1,030 bp	+	35.3%
tRNA-Trp	Transfer RNA	5,744	5,810	67 bp	+	–
tRNA-Ala	Transfer RNA	5,812	5,873	62 bp	−	–
tRNA-Asn	Transfer RNA	5,875	5,947	73 bp	−	–
tRNA-Cys	Transfer RNA	5,986	6,039	54 bp	−	–
tRNA-Tyr	Transfer RNA	6,040	6,108	69 bp	−	–
COX1	Protein-coding gene	6,110	7,681	1,572 bp	+	40.5%
tRNA-Ser (UCN)	Transfer RNA	7,677	7,744	68 bp	−	–
tRNA-Asp	Transfer RNA	7,745	7,806	62 bp	+	–
COX2	Protein-coding gene	7,807	8,496	690 bp	+	43.3%
ATP8	Protein-coding gene	8,551	8,711	161 bp	+	26.7%
tRNA-Lys	Transfer RNA	8,712	8,775	64 bp	+	–
ATP6	Protein-coding gene	8,829	9,509	681 bp	+	39.9%
COX3	Protein-coding gene	9,509	10,292	784 bp	+	41.2%
tRNA-Gly	Transfer RNA	10,293	10,355	63 bp	+	–
ND3	Protein-coding gene	10,356	10,698	343 bp	+	38.8%
tRNA-Arg	Transfer RNA	10,699	10,762	64 bp	+	–
ND4L	Protein-coding gene	10,763	11,053	291 bp	+	36.8%
ND4	Protein-coding gene	11,053	12,408	1,356 bp	+	40.8%
tRNA-His	Transfer RNA	12,409	12,470	62 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	12,471	12,528	58 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	12,528	12,598	71 bp	+	–
ND5	Protein-coding gene	12,599	14,389	1,791 bp	+	36.8%
ND6	Protein-coding gene	14,385	14,888	504 bp	−	33.3%
tRNA-Glu	Transfer RNA	14,898	14,961	64 bp	−	–
CYTB	Protein-coding gene	14,962	16,074	1,113 bp	+	36.9%
tRNA-Thr	Transfer RNA	16,075	16,138	64 bp	+	–
tRNA-Pro	Transfer RNA	16,139	16,201	63 bp	−	–
D-loop	Control region	16,202	17,138	937 bp	–	36.3%