Urocyon cinereoargenteus
Gray fox
GC content
41.58%
Whole genome
Non-coding
1,082 bp
D-loop 1,004 bp
Where Gray fox sits among 2,335 species
Whole-genome GC content against maximum lifespan. Gray fox has the 1,142nd longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,469 bp
- GC skew (G − C) / (G + C)
- −0.267
- AT skew (A − T) / (A + T)
- +0.054
Life history
- Maximum lifespan
- 16.2 years
- Adult weight
- 4.8 kg
- Birth weight
- 95 g
- Female sexual maturity
- 345 days
- Male sexual maturity
- 365 days
- Gestation or incubation
- 57 days
- Litter or clutch size
- 4
- Litters per year
- 1
- Postnatal growth rate
- 0.0127 per day
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02089)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,469 bp
Protein-coding11,338 bp
12S rRNA958 bp
16S rRNA1,583 bp
All tRNA1,511 bp
D-loop1,004 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 956 bp | 45.19% | −0.389 | −0.023 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 40.31% | −0.452 | +0.113 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 43.63% | −0.104 | −0.093 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 41.52% | −0.282 | +0.095 | |||||
| ATP8ATP synthase F0 subunit 8 | 204 bp | 34.80% | −0.493 | +0.128 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 41.26% | −0.352 | −0.020 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 45.03% | −0.218 | −0.063 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 40.17% | −0.266 | +0.014 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 39.73% | −0.237 | −0.073 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 40.57% | −0.399 | +0.028 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,821 bp | 42.28% | −0.374 | +0.043 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 39.77% | −0.429 | +0.277 | |||||
| CYTBCytochrome b | 1,140 bp | 43.86% | −0.344 | +0.025 | |||||
| 12S rRNA12S ribosomal RNA | 958 bp | 42.17% | −0.109 | +0.209 | |||||
| 16S rRNA16S ribosomal RNA | 1,583 bp | 38.53% | −0.079 | +0.172 | |||||
| D-loopControl region (D-loop) | 1,004 bp | 44.62% | −0.263 | −0.025 |
Codon usage
Counts per codon, darker is more frequent3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU99
UUC126
Leu L15.7%
UUA116
UUG32
CUU80
CUC99
CUA211
CUG57
Ile I8.9%
AUU152
AUC185
Met M6.3%
AUA173
AUG68
Val V4.9%
GUU40
GUC41
GUA75
GUG32
Ser S7.5%
UCU55
UCC91
UCA65
UCG23
AGU17
AGC34
Pro P5.1%
CCU51
CCC65
CCA58
CCG19
Thr T8.1%
ACU55
ACC110
ACA116
ACG25
Ala A7.0%
GCU49
GCC104
GCA90
GCG22
Tyr Y3.6%
UAU65
UAC72
His H2.5%
CAU35
CAC61
Gln Q2.4%
CAA64
CAG28
Asn N3.9%
AAU57
AAC92
Lys K2.7%
AAA87
AAG17
Asp D1.9%
GAU25
GAC46
Glu E2.5%
GAA67
GAG28
Cys C0.7%
UGU10
UGC17
Trp W2.7%
UGA79
UGG25
Arg R1.7%
CGU5
CGC11
CGA45
CGG5
Gly G5.7%
GGU38
GGC48
GGA94
GGG36
Stop 0.2%
UAA7
UAG0
AGA1
AGG0
Genome map
38 annotated features in NC_026723.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (41.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,027 | 958 bp | + | 42.2% |
| tRNA-Val | Transfer RNA | 1,028 | 1,094 | 67 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,095 | 2,677 | 1,583 bp | + | 38.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,678 | 2,752 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,755 | 3,710 | 956 bp | + | 45.2% |
| tRNA-Ile | Transfer RNA | 3,711 | 3,780 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,777 | 3,850 | 74 bp | − | – |
| tRNA-Met | Transfer RNA | 3,852 | 3,921 | 70 bp | + | – |
| ND2 | Protein-coding gene | 3,922 | 4,963 | 1,042 bp | + | 40.3% |
| tRNA-Trp | Transfer RNA | 4,964 | 5,030 | 67 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,042 | 5,110 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,112 | 5,183 | 72 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,217 | 5,285 | 69 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,286 | 5,353 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,355 | 6,899 | 1,545 bp | + | 43.6% |
| tRNA-Ser (UCN) | Transfer RNA | 6,897 | 6,965 | 69 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,972 | 7,039 | 68 bp | + | – |
| COX2 | Protein-coding gene | 7,040 | 7,723 | 684 bp | + | 41.5% |
| tRNA-Lys | Transfer RNA | 7,741 | 7,807 | 67 bp | + | – |
| ATP8 | Protein-coding gene | 7,809 | 8,012 | 204 bp | + | 34.8% |
| ATP6 | Protein-coding gene | 7,970 | 8,650 | 681 bp | + | 41.3% |
| COX3 | Protein-coding gene | 8,650 | 9,433 | 784 bp | + | 45.0% |
| tRNA-Gly | Transfer RNA | 9,434 | 9,501 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,502 | 9,847 | 346 bp | + | 40.2% |
| tRNA-Arg | Transfer RNA | 9,849 | 9,918 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,919 | 10,215 | 297 bp | + | 39.7% |
| ND4 | Protein-coding gene | 10,209 | 11,586 | 1,378 bp | + | 40.6% |
| tRNA-His | Transfer RNA | 11,587 | 11,655 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,656 | 11,715 | 60 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,716 | 11,785 | 70 bp | + | – |
| ND5 | Protein-coding gene | 11,786 | 13,606 | 1,821 bp | + | 42.3% |
| ND6 | Protein-coding gene | 13,590 | 14,117 | 528 bp | − | 39.8% |
| tRNA-Glu | Transfer RNA | 14,118 | 14,186 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,191 | 15,330 | 1,140 bp | + | 43.9% |
| tRNA-Thr | Transfer RNA | 15,331 | 15,399 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,400 | 15,465 | 66 bp | − | – |
| D-loop | Control region | 15,466 | 16,469 | 1,004 bp | – | 44.6% |