MitoAge

Varecia rubra

Red ruffed lemur

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Maximum lifespan
37.5 yr
AnAge record
mtDNA size
16,998 bp
RefSeq NC_084385.1
GC content
38.19%
Whole genome
Non-coding
1,608 bp
D-loop 1,523 bp

Where Red ruffed lemur sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red ruffed lemur has the 296th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Red ruffed lemur
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,998 bp
GC skew (G − C) / (G + C)
−0.353
AT skew (A − T) / (A + T)
+0.073

Life history

Maximum lifespan
37.5 years
Adult weight
3.6 kg
Birth weight
109.7 g
Female sexual maturity
609 days
Male sexual maturity
650 days
Gestation or incubation
98 days
Litter or clutch size
2.2

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02815)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,998 bp
Protein-coding11,336 bp
12S rRNA956 bp
16S rRNA1,580 bp
All tRNA1,518 bp
D-loop1,523 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp30.6%29.6%11.2%28.6%39.79%−0.437+0.016
ND2NADH dehydrogenase subunit 21,042 bp35.4%29.5%7.7%27.4%35.13%−0.563+0.092
COX1Cytochrome c oxidase subunit I1,543 bp27.9%31.8%15.8%24.4%40.25%−0.214−0.065
COX2Cytochrome c oxidase subunit II684 bp31.9%28.8%13.2%26.2%39.33%−0.331+0.051
ATP8ATP synthase F0 subunit 8207 bp37.2%30.9%6.8%25.1%31.88%−0.576+0.092
ATP6ATP synthase F0 subunit 6681 bp30.5%31.7%10.0%27.8%37.74%−0.471−0.019
COX3Cytochrome c oxidase subunit III784 bp26.1%30.9%14.3%28.7%42.99%−0.335−0.083
ND3NADH dehydrogenase subunit 3348 bp33.0%28.7%10.1%28.2%38.22%−0.474+0.070
ND4LNADH dehydrogenase subunit 4L297 bp30.0%34.0%10.1%25.9%36.03%−0.439−0.063
ND4NADH dehydrogenase subunit 41,378 bp32.9%30.8%9.9%26.4%36.28%−0.456+0.032
ND5NADH dehydrogenase subunit 51,812 bp34.1%29.9%9.4%26.6%36.04%−0.476+0.066
ND6NADH dehydrogenase subunit 6519 bp44.3%20.4%6.0%29.3%35.26%−0.661+0.369
CYTBCytochrome b1,140 bp30.1%28.9%11.6%29.4%40.97%−0.435+0.019
12S rRNA12S ribosomal RNA956 bp37.2%23.1%16.4%23.2%39.64%−0.172+0.234
16S rRNA16S ribosomal RNA1,580 bp37.9%23.9%15.8%22.4%38.23%−0.172+0.227
D-loopControl region (D-loop)1,523 bp32.1%28.0%14.0%25.9%39.86%−0.298+0.068

Codon usage

Counts per codon, darker is more frequent

3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU112
UUC126
Leu L16.4%
UUA137
UUG14
CUU106
CUC94
CUA260
CUG11
Ile I9.1%
AUU201
AUC145
Met M6.8%
AUA230
AUG27
Val V4.3%
GUU41
GUC33
GUA77
GUG12
Ser S7.4%
UCU57
UCC77
UCA88
UCG3
AGU18
AGC36
Pro P5.2%
CCU61
CCC65
CCA70
CCG0
Thr T8.2%
ACU72
ACC96
ACA136
ACG6
Ala A6.1%
GCU53
GCC96
GCA82
GCG0
Tyr Y3.5%
UAU72
UAC59
His H2.5%
CAU38
CAC57
Gln Q2.4%
CAA84
CAG6
Asn N4.4%
AAU76
AAC90
Lys K2.5%
AAA89
AAG7
Asp D1.7%
GAU31
GAC32
Glu E2.5%
GAA79
GAG17
Cys C0.7%
UGU12
UGC16
Trp W2.8%
UGA95
UGG10
Arg R1.7%
CGU8
CGC14
CGA40
CGG1
Gly G5.6%
GGU54
GGC55
GGA77
GGG26
Stop 0.2%
UAA5
UAG1
AGA1
AGG1

Genome map

38 annotated features in NC_084385.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (38.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,026956 bp+39.6%
tRNA-ValTransfer RNA1,0271,09569 bp+–
16S rRNARibosomal RNA1,0972,6761,580 bp+38.2%
tRNA-Leu (UUR)Transfer RNA2,6772,75276 bp+–
ND1Protein-coding gene2,7563,710955 bp+39.8%
tRNA-IleTransfer RNA3,7113,77969 bp+–
tRNA-GlnTransfer RNA3,7773,85175 bp−–
tRNA-MetTransfer RNA3,8553,92369 bp+–
ND2Protein-coding gene3,9244,9651,042 bp+35.1%
tRNA-TrpTransfer RNA4,9665,03267 bp+–
tRNA-AlaTransfer RNA5,0415,10969 bp−–
tRNA-AsnTransfer RNA5,1125,18473 bp−–
tRNA-CysTransfer RNA5,2205,28566 bp−–
tRNA-TyrTransfer RNA5,2865,35166 bp−–
COX1Protein-coding gene5,3586,9001,543 bp+40.3%
tRNA-Ser (UCN)Transfer RNA6,9016,97272 bp−–
tRNA-AspTransfer RNA6,9767,04469 bp+–
COX2Protein-coding gene7,0457,728684 bp+39.3%
tRNA-LysTransfer RNA7,7327,79968 bp+–
ATP8Protein-coding gene7,8008,006207 bp+31.9%
ATP6Protein-coding gene7,9618,641681 bp+37.7%
COX3Protein-coding gene8,6419,424784 bp+43.0%
tRNA-GlyTransfer RNA9,4259,49470 bp+–
ND3Protein-coding gene9,4959,842348 bp+38.2%
tRNA-ArgTransfer RNA9,8459,91268 bp+–
ND4LProtein-coding gene9,91410,210297 bp+36.0%
ND4Protein-coding gene10,20411,5811,378 bp+36.3%
tRNA-HisTransfer RNA11,58211,65170 bp+–
tRNA-Ser (AGY)Transfer RNA11,65211,71160 bp+–
tRNA-Leu (CUN)Transfer RNA11,71211,78170 bp+–
ND5Protein-coding gene11,78213,5931,812 bp+36.0%
ND6Protein-coding gene13,60614,124519 bp−35.3%
tRNA-GluTransfer RNA14,12514,19369 bp−–
CYTBProtein-coding gene14,19815,3371,140 bp+41.0%
tRNA-ThrTransfer RNA15,33815,40770 bp+–
tRNA-ProTransfer RNA15,41015,47566 bp−–
D-loopControl region15,47616,9981,523 bp–39.9%

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