Variola louti

Yellow-edged lyretail

Maximum lifespan

15 yr

FishBase record

mtDNA size

16,770 bp

RefSeq NC_022138.1

GC content

43.80%

Whole genome

Non-coding

1,067 bp

D-loop 975 bp

Where Yellow-edged lyretail sits among 2,335 species

Whole-genome GC content against maximum lifespan. Yellow-edged lyretail has the 1,246th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,770 bp

GC skew (G − C) / (G + C): −0.256
AT skew (A − T) / (A + T): +0.009

Life history

Maximum lifespan: 15 years

Lifespan from FishBase · FishBase record

About this record

Lifespan source: FishBase v26.06
Based on: an observed animal, origin not stated
Data quality: acceptable
Licence: CC BY-NC 4.0
Status: New in build 2
In the database since: build 2 (2026-11-13)

The lifespan value is for non-commercial use only; the genome data is not restricted by it.

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,770 bp

Protein-coding11,406 bp

12S rRNA961 bp

16S rRNA1,696 bp

All tRNA1,640 bp

D-loop975 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Variola louti genes

ND1NADH dehydrogenase subunit 1	975 bp	26.4%	30.1%	14.4%	29.2%	43.59%	−0.341	−0.065
ND2NADH dehydrogenase subunit 2	1,045 bp	27.0%	27.0%	12.2%	33.9%	46.03%	−0.472	0.000
COX1Cytochrome c oxidase subunit I	1,551 bp	24.5%	31.9%	18.4%	25.1%	43.59%	−0.154	−0.131
COX2Cytochrome c oxidase subunit II	691 bp	28.4%	31.1%	16.5%	24.0%	40.52%	−0.186	−0.046
ATP8ATP synthase F0 subunit 8	168 bp	29.2%	25.0%	11.3%	34.5%	45.83%	−0.506	+0.077
ATP6ATP synthase F0 subunit 6	684 bp	28.2%	30.8%	12.0%	28.9%	40.94%	−0.414	−0.045
COX3Cytochrome c oxidase subunit III	785 bp	25.0%	30.4%	16.8%	27.8%	44.59%	−0.246	−0.099
ND3NADH dehydrogenase subunit 3	349 bp	23.2%	34.7%	14.6%	27.5%	42.12%	−0.306	−0.198
ND4LNADH dehydrogenase subunit 4L	297 bp	21.9%	28.6%	16.5%	33.0%	49.50%	−0.333	−0.133
ND4NADH dehydrogenase subunit 4	1,381 bp	27.7%	29.6%	14.3%	28.3%	42.65%	−0.328	−0.033
ND5NADH dehydrogenase subunit 5	1,839 bp	27.4%	28.1%	13.4%	31.2%	44.54%	−0.399	−0.012
ND6NADH dehydrogenase subunit 6	522 bp	37.7%	17.6%	13.6%	31.0%	44.64%	−0.391	+0.363
CYTBCytochrome b	1,141 bp	24.8%	31.6%	15.9%	27.7%	43.56%	−0.272	−0.121
12S rRNA12S ribosomal RNA	961 bp	30.7%	22.0%	22.0%	25.4%	47.35%	−0.073	+0.166
16S rRNA16S ribosomal RNA	1,696 bp	32.5%	21.0%	21.1%	25.3%	46.40%	−0.090	+0.215
D-loopControl region (D-loop)	975 bp	31.8%	31.1%	13.5%	23.6%	37.13%	−0.271	+0.011

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU117

UUC111

Leu L17.3%

UUA128

UUG28

CUU170

CUC149

CUA159

CUG26

Ile I7.1%

AUU158

AUC113

Met M4.1%

AUA93

AUG62

Val V6.1%

GUU86

GUC51

GUA81

GUG13

Ser S6.3%

UCU57

UCC56

UCA67

UCG8

AGU14

AGC39

Pro P5.8%

CCU81

CCC66

CCA63

CCG11

Thr T8.1%

ACU55

ACC108

ACA130

ACG14

Ala A8.7%

GCU87

GCC108

GCA114

GCG22

Tyr Y3.1%

UAU50

UAC69

His H2.8%

CAU37

CAC69

Gln Q2.7%

CAA85

CAG16

Asn N3.0%

AAU42

AAC74

Lys K2.0%

AAA64

AAG13

Asp D2.1%

GAU28

GAC52

Glu E2.5%

GAA72

GAG24

Cys C0.6%

UGU9

UGC15

Trp W3.0%

UGA98

UGG18

Arg R2.0%

CGU17

CGC9

CGA46

CGG6

Gly G6.4%

GGU69

GGC68

GGA73

GGG32

Stop 0.2%

UAA6

UAG1

AGA0

AGG0

Genome map

39 annotated features in NC_022138.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA23
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (43.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 39 features as a table

Annotated features of Variola louti (NC_022138.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,030	961 bp	+	47.4%
tRNA-Val	Transfer RNA	1,031	1,102	72 bp	+	–
tRNA-Ile	Transfer RNA	1,120	1,196	77 bp	+	–
16S rRNA	Ribosomal RNA	1,200	2,895	1,696 bp	+	46.4%
tRNA-Leu (UUR)	Transfer RNA	2,896	2,969	74 bp	+	–
ND1	Protein-coding gene	2,970	3,944	975 bp	+	43.6%
tRNA-Ile	Transfer RNA	3,949	4,018	70 bp	+	–
tRNA-Gln	Transfer RNA	4,018	4,088	71 bp	−	–
tRNA-Met	Transfer RNA	4,088	4,157	70 bp	+	–
ND2	Protein-coding gene	4,158	5,202	1,045 bp	+	46.0%
tRNA-Trp	Transfer RNA	5,203	5,274	72 bp	+	–
tRNA-Ala	Transfer RNA	5,276	5,344	69 bp	−	–
tRNA-Asn	Transfer RNA	5,346	5,418	73 bp	−	–
tRNA-Cys	Transfer RNA	5,455	5,524	70 bp	−	–
tRNA-Tyr	Transfer RNA	5,524	5,593	70 bp	−	–
COX1	Protein-coding gene	5,595	7,145	1,551 bp	+	43.6%
tRNA-Ser (UCN)	Transfer RNA	7,146	7,216	71 bp	−	–
tRNA-Asp	Transfer RNA	7,219	7,292	74 bp	+	–
COX2	Protein-coding gene	7,301	7,991	691 bp	+	40.5%
tRNA-Lys	Transfer RNA	7,992	8,064	73 bp	+	–
ATP8	Protein-coding gene	8,066	8,233	168 bp	+	45.8%
ATP6	Protein-coding gene	8,224	8,907	684 bp	+	40.9%
COX3	Protein-coding gene	8,907	9,691	785 bp	+	44.6%
tRNA-Gly	Transfer RNA	9,692	9,764	73 bp	+	–
ND3	Protein-coding gene	9,765	10,113	349 bp	+	42.1%
tRNA-Arg	Transfer RNA	10,114	10,182	69 bp	+	–
ND4L	Protein-coding gene	10,183	10,479	297 bp	+	49.5%
ND4	Protein-coding gene	10,473	11,853	1,381 bp	+	42.7%
tRNA-His	Transfer RNA	11,854	11,924	71 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,925	11,995	71 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	12,005	12,077	73 bp	+	–
ND5	Protein-coding gene	12,078	13,916	1,839 bp	+	44.5%
ND6	Protein-coding gene	13,913	14,434	522 bp	−	44.6%
tRNA-Glu	Transfer RNA	14,435	14,503	69 bp	−	–
CYTB	Protein-coding gene	14,513	15,653	1,141 bp	+	43.6%
tRNA-Thr	Transfer RNA	15,654	15,725	72 bp	+	–
tRNA-Pro	Transfer RNA	15,725	15,795	71 bp	−	–
D-loop	Control region	15,796	16,770	975 bp	–	37.1%