Acanthopsetta nadeshnyi
Scale-eye plaice
GC content
45.80%
Whole genome
Non-coding
1,605 bp
D-loop 1,528 bp
Where Scale-eye plaice sits among 2,335 species
Whole-genome GC content against maximum lifespan. Scale-eye plaice has the 1,115th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,206 bp
- GC skew (G − C) / (G + C)
- −0.256
- AT skew (A − T) / (A + T)
- +0.020
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,206 bp
Protein-coding11,390 bp
12S rRNA949 bp
16S rRNA1,714 bp
All tRNA1,549 bp
D-loop1,528 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.97% | −0.310 | −0.079 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 48.42% | −0.435 | −0.039 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 46.22% | −0.193 | −0.073 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.45% | −0.190 | −0.032 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.67% | −0.457 | +0.102 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.47% | −0.396 | −0.147 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.54% | −0.286 | −0.119 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.28% | −0.314 | −0.209 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.49% | −0.389 | −0.098 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.76% | −0.323 | −0.033 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,851 bp | 46.30% | −0.314 | +0.016 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 47.78% | −0.323 | +0.351 | |||||
| CYTBCytochrome b | 1,141 bp | 46.98% | −0.317 | −0.141 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 48.47% | −0.065 | +0.202 | |||||
| 16S rRNA16S ribosomal RNA | 1,714 bp | 46.62% | −0.104 | +0.200 | |||||
| D-loopControl region (D-loop) | 1,528 bp | 35.93% | −0.279 | +0.081 |
Codon usage
Counts per codon, darker is more frequent3,813 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU119
UUC120
Leu L16.8%
UUA88
UUG25
CUU164
CUC177
CUA134
CUG52
Ile I6.9%
AUU143
AUC122
Met M3.9%
AUA87
AUG61
Val V6.3%
GUU70
GUC69
GUA74
GUG29
Ser S6.6%
UCU54
UCC63
UCA64
UCG15
AGU10
AGC45
Pro P6.0%
CCU60
CCC87
CCA68
CCG12
Thr T7.5%
ACU54
ACC101
ACA107
ACG25
Ala A9.4%
GCU77
GCC133
GCA133
GCG14
Tyr Y2.9%
UAU39
UAC71
His H2.7%
CAU20
CAC82
Gln Q2.5%
CAA75
CAG20
Asn N3.1%
AAU35
AAC84
Lys K2.0%
AAA64
AAG11
Asp D2.1%
GAU21
GAC59
Glu E2.5%
GAA65
GAG31
Cys C0.6%
UGU11
UGC13
Trp W3.2%
UGA101
UGG21
Arg R2.0%
CGU12
CGC16
CGA37
CGG11
Gly G6.6%
GGU39
GGC92
GGA72
GGG48
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_066465.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 48.5% |
| tRNA-Val | Transfer RNA | 1,018 | 1,090 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,804 | 1,714 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,807 | 2,880 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,881 | 3,855 | 975 bp | + | 47.0% |
| tRNA-Ile | Transfer RNA | 3,861 | 3,930 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,930 | 4,000 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,001 | 4,069 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,069 | 5,113 | 1,045 bp | + | 48.4% |
| tRNA-Trp | Transfer RNA | 5,114 | 5,185 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,187 | 5,255 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,257 | 5,329 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,367 | 5,431 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,433 | 5,500 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,502 | 7,061 | 1,560 bp | + | 46.2% |
| tRNA-Ser (UCN) | Transfer RNA | 7,062 | 7,132 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,147 | 7,217 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,224 | 7,914 | 691 bp | + | 46.5% |
| tRNA-Lys | Transfer RNA | 7,915 | 7,987 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,989 | 8,156 | 168 bp | + | 41.7% |
| ATP6 | Protein-coding gene | 8,147 | 8,830 | 684 bp | + | 45.5% |
| COX3 | Protein-coding gene | 8,830 | 9,614 | 785 bp | + | 48.5% |
| tRNA-Gly | Transfer RNA | 9,615 | 9,686 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,687 | 10,035 | 349 bp | + | 49.3% |
| tRNA-Arg | Transfer RNA | 10,036 | 10,104 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 48.5% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 45.8% |
| tRNA-His | Transfer RNA | 11,776 | 11,845 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,846 | 11,912 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,917 | 11,989 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,990 | 13,840 | 1,851 bp | + | 46.3% |
| ND6 | Protein-coding gene | 13,803 | 14,321 | 519 bp | − | 47.8% |
| tRNA-Glu | Transfer RNA | 14,322 | 14,390 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,395 | 15,535 | 1,141 bp | + | 47.0% |
| tRNA-Thr | Transfer RNA | 15,536 | 15,608 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,608 | 15,678 | 71 bp | − | – |
| D-loop | Control region | 15,679 | 17,206 | 1,528 bp | – | 35.9% |