MitoAge

Acrocephalus scirpaceus

Eurasian reed-warbler

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Maximum lifespan
16.9 yr
AnAge record
mtDNA size
17,903 bp
RefSeq NC_010227.1
GC content
47.90%
Whole genome
Non-coding
2,408 bp
D-loop 2,328 bp

Where Eurasian reed-warbler sits among 2,335 species

Whole-genome GC content against maximum lifespan. Eurasian reed-warbler has the 1,118th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Eurasian reed-warbler
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,903 bp
GC skew (G − C) / (G + C)
−0.346
AT skew (A − T) / (A + T)
+0.124

Life history

Maximum lifespan
16.9 years
Adult weight
12.3 g
Female sexual maturity
365 days
Male sexual maturity
365 days
Postnatal growth rate
0.536 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00761)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,903 bp
Protein-coding11,382 bp
12S rRNA977 bp
16S rRNA1,603 bp
All tRNA1,542 bp
D-loop2,328 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp25.7%24.4%16.8%33.1%49.90%−0.328+0.024
ND2NADH dehydrogenase subunit 21,041 bp30.0%22.6%12.8%34.7%47.45%−0.462+0.141
COX1Cytochrome c oxidase subunit I1,551 bp27.0%23.4%18.5%31.1%49.65%−0.255+0.070
COX2Cytochrome c oxidase subunit II684 bp29.7%21.3%16.1%32.9%48.98%−0.343+0.163
ATP8ATP synthase F0 subunit 8171 bp35.7%23.4%5.8%35.1%40.94%−0.714+0.208
ATP6ATP synthase F0 subunit 6684 bp29.1%23.4%11.8%35.7%47.52%−0.502+0.109
COX3Cytochrome c oxidase subunit III784 bp24.5%23.9%17.7%33.9%51.66%−0.314+0.013
ND3NADH dehydrogenase subunit 3351 bp29.1%23.4%14.5%33.0%47.58%−0.389+0.109
ND4LNADH dehydrogenase subunit 4L297 bp26.6%20.9%13.1%39.4%52.53%−0.500+0.121
ND4NADH dehydrogenase subunit 41,378 bp29.6%22.6%12.7%35.1%47.75%−0.468+0.133
ND5NADH dehydrogenase subunit 51,818 bp29.7%22.7%13.2%34.4%47.64%−0.446+0.134
ND6NADH dehydrogenase subunit 6519 bp38.9%11.2%11.6%38.3%49.90%−0.537+0.554
CYTBCytochrome b1,143 bp27.1%24.2%14.3%34.3%48.64%−0.410+0.056
12S rRNA12S ribosomal RNA977 bp30.8%20.1%21.8%27.3%49.13%−0.113+0.211
16S rRNA16S ribosomal RNA1,603 bp34.4%20.4%19.8%25.4%45.23%−0.123+0.255
D-loopControl region (D-loop)2,328 bp25.6%26.2%14.9%33.3%48.20%−0.381−0.010

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU54
UUC173
Leu L17.2%
UUA45
UUG28
CUU32
CUC142
CUA308
CUG98
Ile I7.4%
AUU73
AUC207
Met M4.3%
AUA104
AUG61
Val V5.3%
GUU27
GUC62
GUA71
GUG42
Ser S7.3%
UCU26
UCC96
UCA88
UCG10
AGU4
AGC53
Pro P5.9%
CCU21
CCC86
CCA107
CCG11
Thr T8.4%
ACU43
ACC142
ACA120
ACG15
Ala A8.6%
GCU42
GCC160
GCA107
GCG18
Tyr Y2.9%
UAU24
UAC85
His H2.8%
CAU12
CAC96
Gln Q2.4%
CAA79
CAG14
Asn N3.4%
AAU19
AAC110
Lys K2.3%
AAA74
AAG13
Asp D1.8%
GAU11
GAC59
Glu E2.3%
GAA68
GAG20
Cys C0.8%
UGU4
UGC27
Trp W2.8%
UGA93
UGG14
Arg R1.9%
CGU8
CGC15
CGA43
CGG5
Gly G5.8%
GGU13
GGC75
GGA84
GGG47
Stop 0.3%
UAA7
UAG1
AGA2
AGG1

Genome map

39 annotated features in NC_010227.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (47.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,045977 bp+49.1%
tRNA-ValTransfer RNA1,0461,11469 bp+–
16S rRNARibosomal RNA1,1152,7171,603 bp+45.2%
tRNA-Leu (UUR)Transfer RNA2,7182,79275 bp+–
ND1Protein-coding gene2,8123,789978 bp+49.9%
tRNA-IleTransfer RNA3,7993,87274 bp+–
tRNA-GlnTransfer RNA3,8793,94971 bp−–
tRNA-MetTransfer RNA3,9494,01769 bp+–
ND2Protein-coding gene4,0185,0581,041 bp+47.5%
tRNA-TrpTransfer RNA5,0595,12870 bp+–
tRNA-AlaTransfer RNA5,1305,19869 bp−–
tRNA-AsnTransfer RNA5,1995,27173 bp−–
tRNA-CysTransfer RNA5,2745,34067 bp−–
tRNA-TyrTransfer RNA5,3405,41071 bp−–
COX1Protein-coding gene5,4126,9621,551 bp+49.7%
tRNA-Ser (UCN)Transfer RNA6,9547,02673 bp−–
tRNA-AspTransfer RNA7,0327,10069 bp+–
COX2Protein-coding gene7,1047,787684 bp+49.0%
tRNA-LysTransfer RNA7,7897,85769 bp+–
ATP8Protein-coding gene7,8598,029171 bp+40.9%
ATP6Protein-coding gene8,0208,703684 bp+47.5%
COX3Protein-coding gene8,7109,493784 bp+51.7%
tRNA-GlyTransfer RNA9,4949,56269 bp+–
ND3Protein-coding gene9,5639,913351 bp+47.6%
tRNA-ArgTransfer RNA9,9159,98470 bp+–
ND4LProtein-coding gene9,98610,282297 bp+52.5%
ND4Protein-coding gene10,27611,6531,378 bp+47.8%
tRNA-HisTransfer RNA11,65411,72370 bp+–
tRNA-Ser (AGY)Transfer RNA11,72411,78966 bp+–
tRNA-Leu (CUN)Transfer RNA11,79011,86071 bp+–
ND5Protein-coding gene11,86113,6781,818 bp+47.6%
CYTBProtein-coding gene13,68914,8311,143 bp+48.6%
tRNA-ThrTransfer RNA14,83514,90369 bp+–
D-loopControl region14,90416,0251,122 bp–48.2%
tRNA-ProTransfer RNA16,02616,09570 bp−–
ND6Protein-coding gene16,10616,624519 bp−49.9%
tRNA-GluTransfer RNA16,62616,69772 bp−–
D-loopControl region16,69817,9031,206 bp–48.2%

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