MitoAge

Antilope cervicapra

Blackbuck

Add to compare Download FASTA
Maximum lifespan
23.9 yr
AnAge record
mtDNA size
16,431 bp
RefSeq NC_012098.1
GC content
39.27%
Whole genome
Non-coding
1,057 bp
D-loop 998 bp

Where Blackbuck sits among 2,335 species

Whole-genome GC content against maximum lifespan. Blackbuck has the 700th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Blackbuck
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,431 bp
GC skew (G − C) / (G + C)
−0.319
AT skew (A − T) / (A + T)
+0.110

Life history

Maximum lifespan
23.9 years
Adult weight
37.5 kg
Birth weight
3.9 kg
Female sexual maturity
466 days
Gestation or incubation
168 days
Litter or clutch size
1
Litters per year
1.9

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01902)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,431 bp
Protein-coding11,351 bp
12S rRNA957 bp
16S rRNA1,570 bp
All tRNA1,503 bp
D-loop998 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp32.4%27.3%12.6%27.7%40.33%−0.373+0.086
ND2NADH dehydrogenase subunit 21,044 bp36.3%26.6%8.9%28.2%37.07%−0.519+0.154
COX1Cytochrome c oxidase subunit I1,545 bp28.7%30.4%16.2%24.7%40.91%−0.209−0.030
COX2Cytochrome c oxidase subunit II684 bp34.4%26.5%14.3%24.9%39.18%−0.269+0.130
ATP8ATP synthase F0 subunit 8201 bp39.3%27.4%7.0%26.4%33.33%−0.582+0.179
ATP6ATP synthase F0 subunit 6681 bp32.3%28.8%11.2%27.8%38.91%−0.426+0.058
COX3Cytochrome c oxidase subunit III784 bp27.2%29.2%13.9%29.7%43.62%−0.363−0.036
ND3NADH dehydrogenase subunit 3347 bp31.1%29.7%11.8%27.4%39.19%−0.397+0.024
ND4LNADH dehydrogenase subunit 4L297 bp32.7%29.6%11.4%26.3%37.71%−0.393+0.049
ND4NADH dehydrogenase subunit 41,378 bp32.4%27.9%10.9%28.9%39.77%−0.453+0.075
ND5NADH dehydrogenase subunit 51,830 bp33.3%27.3%10.9%28.5%39.45%−0.446+0.099
ND6NADH dehydrogenase subunit 6528 bp41.9%20.8%7.6%29.7%37.31%−0.594+0.335
CYTBCytochrome b1,140 bp31.8%26.4%13.4%28.4%41.84%−0.358+0.092
12S rRNA12S ribosomal RNA957 bp37.3%22.8%17.6%22.4%39.92%−0.120+0.242
16S rRNA16S ribosomal RNA1,570 bp38.5%23.9%17.1%20.5%37.58%−0.092+0.233
D-loopControl region (D-loop)998 bp32.5%27.5%15.3%24.7%40.08%−0.235+0.084

Codon usage

Counts per codon, darker is more frequent

3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU129
UUC112
Leu L15.7%
UUA101
UUG22
CUU85
CUC93
CUA271
CUG26
Ile I8.5%
AUU170
AUC153
Met M6.7%
AUA208
AUG48
Val V5.1%
GUU37
GUC52
GUA93
GUG13
Ser S7.4%
UCU36
UCC77
UCA104
UCG5
AGU17
AGC43
Pro P5.0%
CCU38
CCC64
CCA83
CCG6
Thr T8.3%
ACU50
ACC85
ACA173
ACG9
Ala A6.5%
GCU43
GCC78
GCA120
GCG7
Tyr Y3.5%
UAU54
UAC79
His H2.5%
CAU28
CAC68
Gln Q2.3%
CAA79
CAG9
Asn N4.3%
AAU46
AAC118
Lys K2.5%
AAA86
AAG11
Asp D1.8%
GAU20
GAC47
Glu E2.5%
GAA77
GAG18
Cys C0.6%
UGU6
UGC17
Trp W2.7%
UGA95
UGG9
Arg R1.6%
CGU3
CGC14
CGA44
CGG1
Gly G5.6%
GGU33
GGC53
GGA100
GGG28
Stop 0.3%
UAA8
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_012098.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,025957 bp+39.9%
tRNA-ValTransfer RNA1,0261,09267 bp+–
16S rRNARibosomal RNA1,0932,6621,570 bp+37.6%
tRNA-Leu (UUR)Transfer RNA2,6632,73775 bp+–
ND1Protein-coding gene2,7403,696957 bp+40.3%
tRNA-IleTransfer RNA3,6963,76469 bp+–
tRNA-GlnTransfer RNA3,7623,83372 bp−–
tRNA-MetTransfer RNA3,8363,90469 bp+–
ND2Protein-coding gene3,9054,9481,044 bp+37.1%
tRNA-TrpTransfer RNA4,9475,01367 bp+–
tRNA-AlaTransfer RNA5,0155,08369 bp−–
tRNA-AsnTransfer RNA5,0855,15773 bp−–
tRNA-CysTransfer RNA5,1915,25767 bp−–
tRNA-TyrTransfer RNA5,2575,32569 bp−–
COX1Protein-coding gene5,3276,8711,545 bp+40.9%
tRNA-Ser (UCN)Transfer RNA6,8696,93971 bp−–
tRNA-AspTransfer RNA6,9467,01368 bp+–
COX2Protein-coding gene7,0157,698684 bp+39.2%
tRNA-LysTransfer RNA7,7027,76968 bp+–
ATP8Protein-coding gene7,7717,971201 bp+33.3%
ATP6Protein-coding gene7,9328,612681 bp+38.9%
COX3Protein-coding gene8,6129,395784 bp+43.6%
tRNA-GlyTransfer RNA9,3969,46469 bp+–
ND3Protein-coding gene9,4659,811347 bp+39.2%
tRNA-ArgTransfer RNA9,8129,88069 bp+–
ND4LProtein-coding gene9,88110,177297 bp+37.7%
ND4Protein-coding gene10,17111,5481,378 bp+39.8%
tRNA-HisTransfer RNA11,54811,61871 bp+–
tRNA-Ser (AGY)Transfer RNA11,61911,67860 bp+–
tRNA-Leu (CUN)Transfer RNA11,68011,74061 bp+–
ND5Protein-coding gene11,74113,5701,830 bp+39.5%
ND6Protein-coding gene13,55414,081528 bp−37.3%
tRNA-GluTransfer RNA14,08214,15069 bp−–
CYTBProtein-coding gene14,15515,2941,140 bp+41.8%
tRNA-ThrTransfer RNA15,29815,36770 bp+–
tRNA-ProTransfer RNA15,36815,43366 bp−–
D-loopControl region15,43416,431998 bp–40.1%

Downloads