MitoAge

Axis porcinus

Hog deer

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Maximum lifespan
22.9 yr
AnAge record
mtDNA size
16,375 bp
RefSeq NC_020681.1
GC content
37.44%
Whole genome
Non-coding
998 bp
D-loop 689 bp

Where Hog deer sits among 2,335 species

Whole-genome GC content against maximum lifespan. Hog deer has the 745th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Hog deer
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,375 bp
GC skew (G − C) / (G + C)
−0.295
AT skew (A − T) / (A + T)
+0.070

Life history

Maximum lifespan
22.9 years
Adult weight
43 kg
Birth weight
2.5 kg
Female sexual maturity
304 days
Gestation or incubation
232 days
Litter or clutch size
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02016)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,375 bp
Protein-coding11,338 bp
12S rRNA956 bp
16S rRNA1,570 bp
All tRNA1,516 bp
D-loop689 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.3%29.8%11.9%27.0%38.91%−0.387+0.024
ND2NADH dehydrogenase subunit 21,042 bp36.7%29.5%8.8%25.0%33.88%−0.479+0.109
COX1Cytochrome c oxidase subunit I1,545 bp28.9%33.1%16.2%21.7%37.99%−0.145−0.067
COX2Cytochrome c oxidase subunit II684 bp34.9%28.2%13.9%23.0%36.84%−0.246+0.106
ATP8ATP synthase F0 subunit 8201 bp41.8%28.9%6.0%23.4%29.35%−0.593+0.183
ATP6ATP synthase F0 subunit 6681 bp30.8%30.7%12.5%26.0%38.47%−0.351+0.002
COX3Cytochrome c oxidase subunit III784 bp27.7%30.4%14.4%27.6%41.96%−0.313−0.046
ND3NADH dehydrogenase subunit 3346 bp30.1%29.2%12.4%28.3%40.75%−0.390+0.015
ND4LNADH dehydrogenase subunit 4L297 bp31.0%35.7%13.1%20.2%33.33%−0.212−0.071
ND4NADH dehydrogenase subunit 41,378 bp32.3%30.3%10.2%27.1%37.37%−0.452+0.031
ND5NADH dehydrogenase subunit 51,821 bp33.5%30.3%10.4%25.8%36.24%−0.424+0.051
ND6NADH dehydrogenase subunit 6528 bp40.5%22.2%8.5%28.8%37.31%−0.543+0.293
CYTBCytochrome b1,140 bp31.3%28.9%12.8%26.9%39.74%−0.355+0.039
12S rRNA12S ribosomal RNA956 bp36.6%23.7%17.6%22.1%39.64%−0.113+0.213
16S rRNA16S ribosomal RNA1,570 bp38.2%24.5%17.0%20.3%37.33%−0.089+0.220
D-loopControl region (D-loop)689 bp30.3%31.5%15.4%22.8%38.17%−0.194−0.019

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.6%
UUU131
UUC120
Leu L15.4%
UUA139
UUG11
CUU74
CUC87
CUA246
CUG28
Ile I9.0%
AUU238
AUC103
Met M6.8%
AUA214
AUG44
Val V5.0%
GUU52
GUC37
GUA82
GUG19
Ser S7.3%
UCU58
UCC59
UCA100
UCG7
AGU19
AGC36
Pro P5.1%
CCU40
CCC63
CCA83
CCG6
Thr T7.9%
ACU61
ACC67
ACA164
ACG10
Ala A6.4%
GCU45
GCC82
GCA109
GCG9
Tyr Y3.4%
UAU81
UAC50
His H2.4%
CAU40
CAC52
Gln Q2.4%
CAA85
CAG7
Asn N4.4%
AAU90
AAC76
Lys K2.5%
AAA90
AAG5
Asp D1.8%
GAU26
GAC43
Glu E2.6%
GAA80
GAG17
Cys C0.6%
UGU2
UGC20
Trp W2.7%
UGA99
UGG5
Arg R1.7%
CGU7
CGC15
CGA40
CGG1
Gly G5.7%
GGU38
GGC59
GGA96
GGG24
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020681.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,025956 bp+39.6%
tRNA-ValTransfer RNA1,0261,09267 bp+–
16S rRNARibosomal RNA1,0932,6621,570 bp+37.3%
tRNA-Leu (UUR)Transfer RNA2,6632,73775 bp+–
ND1Protein-coding gene2,7403,695956 bp+38.9%
tRNA-IleTransfer RNA3,6963,76469 bp+–
tRNA-GlnTransfer RNA3,7623,83372 bp−–
tRNA-MetTransfer RNA3,8363,90469 bp+–
ND2Protein-coding gene3,9054,9461,042 bp+33.9%
tRNA-TrpTransfer RNA4,9475,01468 bp+–
tRNA-AlaTransfer RNA5,0165,08469 bp−–
tRNA-AsnTransfer RNA5,0865,15873 bp−–
tRNA-CysTransfer RNA5,1915,25868 bp−–
tRNA-TyrTransfer RNA5,2595,32870 bp−–
COX1Protein-coding gene5,3306,8741,545 bp+38.0%
tRNA-Ser (UCN)Transfer RNA6,8726,94372 bp−–
tRNA-AspTransfer RNA6,9497,01668 bp+–
COX2Protein-coding gene7,0187,701684 bp+36.8%
tRNA-LysTransfer RNA7,7057,77268 bp+–
ATP8Protein-coding gene7,7747,974201 bp+29.4%
ATP6Protein-coding gene7,9358,615681 bp+38.5%
COX3Protein-coding gene8,6159,398784 bp+42.0%
tRNA-GlyTransfer RNA9,3999,46769 bp+–
ND3Protein-coding gene9,4689,813346 bp+40.8%
tRNA-ArgTransfer RNA9,8149,88370 bp+–
ND4LProtein-coding gene9,88410,180297 bp+33.3%
ND4Protein-coding gene10,17411,5511,378 bp+37.4%
tRNA-HisTransfer RNA11,55211,62069 bp+–
tRNA-Ser (AGY)Transfer RNA11,62111,68060 bp+–
tRNA-Leu (CUN)Transfer RNA11,68211,75170 bp+–
ND5Protein-coding gene11,75213,5721,821 bp+36.2%
ND6Protein-coding gene13,55614,083528 bp−37.3%
tRNA-GluTransfer RNA14,08414,15269 bp−–
CYTBProtein-coding gene14,15715,2961,140 bp+39.7%
tRNA-ThrTransfer RNA15,30015,36970 bp+–
tRNA-ProTransfer RNA15,36915,43466 bp−–
D-loopControl region15,44216,130689 bp–38.2%

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