MitoAge

Bos grunniens

Yak

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Maximum lifespan
26.3 yr
AnAge record
mtDNA size
16,323 bp
RefSeq NC_006380.3
GC content
39.00%
Whole genome
Non-coding
954 bp
D-loop 893 bp

Where Yak sits among 2,335 species

Whole-genome GC content against maximum lifespan. Yak has the 575th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Yak
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,323 bp
GC skew (G − C) / (G + C)
−0.323
AT skew (A − T) / (A + T)
+0.105

Life history

Maximum lifespan
26.3 years
Adult weight
667 kg
Birth weight
18 kg
Body temperature
38 °C
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
274 days
Litter or clutch size
1
Litters per year
0.8

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01907)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,323 bp
Protein-coding11,335 bp
12S rRNA957 bp
16S rRNA1,571 bp
All tRNA1,509 bp
D-loop893 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp32.3%26.5%12.2%29.0%41.21%−0.406+0.100
ND2NADH dehydrogenase subunit 21,042 bp37.2%27.4%8.1%27.3%35.32%−0.543+0.151
COX1Cytochrome c oxidase subunit I1,545 bp28.7%29.5%16.3%25.4%41.75%−0.219−0.013
COX2Cytochrome c oxidase subunit II684 bp34.4%28.5%14.5%22.7%37.14%−0.220+0.093
ATP8ATP synthase F0 subunit 8201 bp41.8%29.4%6.0%22.9%28.86%−0.586+0.175
ATP6ATP synthase F0 subunit 6681 bp33.5%28.6%11.2%26.7%37.89%−0.411+0.078
COX3Cytochrome c oxidase subunit III781 bp26.1%29.2%15.2%29.4%44.69%−0.318−0.056
ND3NADH dehydrogenase subunit 3346 bp30.9%28.0%12.1%28.9%41.04%−0.408+0.049
ND4LNADH dehydrogenase subunit 4L297 bp32.0%33.0%11.8%23.2%35.02%−0.327−0.016
ND4NADH dehydrogenase subunit 41,378 bp33.4%29.6%10.0%27.0%37.01%−0.459+0.060
ND5NADH dehydrogenase subunit 51,821 bp32.9%27.5%10.7%29.0%39.65%−0.463+0.090
ND6NADH dehydrogenase subunit 6528 bp42.2%20.8%7.6%29.4%36.93%−0.590+0.339
CYTBCytochrome b1,140 bp31.8%26.3%13.1%28.9%41.93%−0.377+0.094
12S rRNA12S ribosomal RNA957 bp36.5%22.8%18.2%22.6%40.75%−0.108+0.231
16S rRNA16S ribosomal RNA1,571 bp38.1%24.1%17.0%20.8%37.75%−0.099+0.225
D-loopControl region (D-loop)893 bp32.4%28.7%13.9%25.1%38.97%−0.287+0.061

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU108
UUC135
Leu L15.6%
UUA112
UUG13
CUU60
CUC95
CUA282
CUG32
Ile I8.7%
AUU181
AUC149
Met M6.9%
AUA223
AUG38
Val V4.8%
GUU35
GUC44
GUA90
GUG14
Ser S7.2%
UCU59
UCC58
UCA98
UCG5
AGU15
AGC38
Pro P5.0%
CCU36
CCC68
CCA83
CCG4
Thr T8.3%
ACU50
ACC84
ACA167
ACG13
Ala A6.6%
GCU58
GCC85
GCA104
GCG3
Tyr Y3.6%
UAU60
UAC75
His H2.5%
CAU36
CAC59
Gln Q2.3%
CAA83
CAG4
Asn N4.3%
AAU60
AAC104
Lys K2.6%
AAA90
AAG9
Asp D1.8%
GAU25
GAC43
Glu E2.5%
GAA80
GAG15
Cys C0.6%
UGU6
UGC16
Trp W2.7%
UGA92
UGG12
Arg R1.7%
CGU7
CGC11
CGA41
CGG4
Gly G5.8%
GGU30
GGC61
GGA99
GGG29
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_006380.3

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region1893893 bp–39.0%
tRNA-PheTransfer RNA89496067 bp+–
12S rRNARibosomal RNA9611,917957 bp+40.8%
tRNA-ValTransfer RNA1,9181,98467 bp+–
16S rRNARibosomal RNA1,9853,5551,571 bp+37.8%
tRNA-Leu (UUR)Transfer RNA3,5563,63075 bp+–
ND1Protein-coding gene3,6334,588956 bp+41.2%
tRNA-IleTransfer RNA4,5894,65769 bp+–
tRNA-GlnTransfer RNA4,6554,72672 bp−–
tRNA-MetTransfer RNA4,7294,79769 bp+–
ND2Protein-coding gene4,7985,8391,042 bp+35.3%
tRNA-TrpTransfer RNA5,8405,90667 bp+–
tRNA-AlaTransfer RNA5,9085,97669 bp−–
tRNA-AsnTransfer RNA5,9786,05174 bp−–
tRNA-CysTransfer RNA6,0846,15067 bp−–
tRNA-TyrTransfer RNA6,1516,21868 bp−–
COX1Protein-coding gene6,2207,7641,545 bp+41.8%
tRNA-Ser (UCN)Transfer RNA7,7627,83271 bp−–
tRNA-AspTransfer RNA7,8377,90569 bp+–
COX2Protein-coding gene7,9078,590684 bp+37.1%
tRNA-LysTransfer RNA8,5948,66067 bp+–
ATP8Protein-coding gene8,6628,862201 bp+28.9%
ATP6Protein-coding gene8,8239,503681 bp+37.9%
COX3Protein-coding gene9,50310,283781 bp+44.7%
tRNA-GlyTransfer RNA10,28710,35569 bp+–
ND3Protein-coding gene10,35610,701346 bp+41.0%
tRNA-ArgTransfer RNA10,70310,77169 bp+–
ND4LProtein-coding gene10,77211,068297 bp+35.0%
ND4Protein-coding gene11,06212,4391,378 bp+37.0%
tRNA-HisTransfer RNA12,44012,50970 bp+–
tRNA-Ser (AGY)Transfer RNA12,51012,56960 bp+–
tRNA-Leu (CUN)Transfer RNA12,57112,64070 bp+–
ND5Protein-coding gene12,64114,4611,821 bp+39.7%
ND6Protein-coding gene14,44514,972528 bp−36.9%
tRNA-GluTransfer RNA14,97315,04169 bp−–
CYTBProtein-coding gene15,04616,1851,140 bp+41.9%
tRNA-ThrTransfer RNA16,19016,25869 bp+–
tRNA-ProTransfer RNA16,25816,32366 bp−–

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