MitoAge

Bos taurus

Domestic cattle

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Maximum lifespan
20 yr
AnAge record
mtDNA size
16,338 bp
RefSeq NC_006853.1
GC content
39.42%
Whole genome
Non-coding
971 bp
D-loop 910 bp

Where Domestic cattle sits among 2,335 species

Whole-genome GC content against maximum lifespan. Domestic cattle has the 905th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Domestic cattle
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,338 bp
GC skew (G − C) / (G + C)
−0.316
AT skew (A − T) / (A + T)
+0.103

Life history

Maximum lifespan
20 years
Adult weight
750 kg
Basal metabolic rate
306.77 W
Body temperature
38 °C
Female sexual maturity
548 days
Male sexual maturity
365 days
Gestation or incubation
277 days
Litter or clutch size
1
Litters per year
1
Postnatal growth rate
0.0031 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01910)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
questionable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,338 bp
Protein-coding11,335 bp
12S rRNA955 bp
16S rRNA1,571 bp
All tRNA1,509 bp
D-loop910 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.7%27.6%12.9%27.8%40.69%−0.368+0.069
ND2NADH dehydrogenase subunit 21,042 bp36.3%28.3%9.0%26.4%35.41%−0.491+0.123
COX1Cytochrome c oxidase subunit I1,545 bp28.7%29.6%16.3%25.4%41.68%−0.217−0.014
COX2Cytochrome c oxidase subunit II684 bp34.1%27.3%14.8%23.8%38.60%−0.235+0.110
ATP8ATP synthase F0 subunit 8201 bp39.8%28.4%8.0%23.9%31.84%−0.500+0.168
ATP6ATP synthase F0 subunit 6681 bp33.6%27.9%11.0%27.5%38.47%−0.427+0.093
COX3Cytochrome c oxidase subunit III781 bp26.5%29.4%15.0%29.1%44.05%−0.320−0.053
ND3NADH dehydrogenase subunit 3346 bp30.3%27.2%12.4%30.1%42.49%−0.415+0.055
ND4LNADH dehydrogenase subunit 4L297 bp32.3%31.6%11.4%24.6%36.03%−0.364+0.011
ND4NADH dehydrogenase subunit 41,378 bp32.2%28.6%11.0%28.2%39.19%−0.437+0.060
ND5NADH dehydrogenase subunit 51,821 bp32.7%27.6%10.5%29.3%39.76%−0.472+0.085
ND6NADH dehydrogenase subunit 6528 bp40.9%22.2%8.7%28.2%36.93%−0.528+0.297
CYTBCytochrome b1,140 bp31.2%25.3%13.4%30.1%43.51%−0.383+0.106
12S rRNA12S ribosomal RNA955 bp36.8%22.6%18.0%22.6%40.63%−0.113+0.238
16S rRNA16S ribosomal RNA1,571 bp37.7%23.6%17.6%21.0%38.64%−0.087+0.230
D-loopControl region (D-loop)910 bp33.0%28.9%13.6%24.5%38.13%−0.285+0.066

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU107
UUC133
Leu L15.7%
UUA110
UUG17
CUU62
CUC94
CUA283
CUG29
Ile I8.6%
AUU165
AUC160
Met M6.9%
AUA216
AUG45
Val V5.0%
GUU40
GUC49
GUA86
GUG16
Ser S7.3%
UCU51
UCC65
UCA99
UCG5
AGU12
AGC45
Pro P5.1%
CCU42
CCC63
CCA85
CCG3
Thr T8.2%
ACU44
ACC96
ACA154
ACG16
Ala A6.6%
GCU53
GCC91
GCA104
GCG2
Tyr Y3.6%
UAU64
UAC74
His H2.4%
CAU30
CAC63
Gln Q2.3%
CAA79
CAG8
Asn N4.2%
AAU60
AAC100
Lys K2.6%
AAA90
AAG10
Asp D1.8%
GAU23
GAC46
Glu E2.5%
GAA78
GAG17
Cys C0.6%
UGU6
UGC16
Trp W2.7%
UGA92
UGG12
Arg R1.7%
CGU7
CGC11
CGA42
CGG3
Gly G5.7%
GGU27
GGC62
GGA97
GGG31
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_006853.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA36443067 bp+–
12S rRNARibosomal RNA4311,385955 bp+40.6%
tRNA-ValTransfer RNA1,3861,45267 bp+–
16S rRNARibosomal RNA1,4533,0231,571 bp+38.6%
tRNA-Leu (UUR)Transfer RNA3,0243,09875 bp+–
ND1Protein-coding gene3,1014,056956 bp+40.7%
tRNA-IleTransfer RNA4,0574,12569 bp+–
tRNA-GlnTransfer RNA4,1234,19472 bp−–
tRNA-MetTransfer RNA4,1974,26569 bp+–
ND2Protein-coding gene4,2665,3071,042 bp+35.4%
tRNA-TrpTransfer RNA5,3085,37467 bp+–
tRNA-AlaTransfer RNA5,3765,44469 bp−–
tRNA-AsnTransfer RNA5,4465,51873 bp−–
tRNA-CysTransfer RNA5,5515,61767 bp−–
tRNA-TyrTransfer RNA5,6185,68568 bp−–
COX1Protein-coding gene5,6877,2311,545 bp+41.7%
tRNA-Ser (UCN)Transfer RNA7,2297,29971 bp−–
tRNA-AspTransfer RNA7,3047,37269 bp+–
COX2Protein-coding gene7,3748,057684 bp+38.6%
tRNA-LysTransfer RNA8,0618,12767 bp+–
ATP8Protein-coding gene8,1298,329201 bp+31.8%
ATP6Protein-coding gene8,2908,970681 bp+38.5%
COX3Protein-coding gene8,9709,750781 bp+44.1%
tRNA-GlyTransfer RNA9,7549,82269 bp+–
ND3Protein-coding gene9,82310,168346 bp+42.5%
tRNA-ArgTransfer RNA10,17010,23869 bp+–
ND4LProtein-coding gene10,23910,535297 bp+36.0%
ND4Protein-coding gene10,52911,9061,378 bp+39.2%
tRNA-HisTransfer RNA11,90711,97670 bp+–
tRNA-Ser (AGY)Transfer RNA11,97712,03660 bp+–
tRNA-Leu (CUN)Transfer RNA12,03812,10871 bp+–
ND5Protein-coding gene12,10913,9291,821 bp+39.8%
ND6Protein-coding gene13,91314,440528 bp−36.9%
tRNA-GluTransfer RNA14,44114,50969 bp−–
CYTBProtein-coding gene14,51415,6531,140 bp+43.5%
tRNA-ThrTransfer RNA15,65815,72669 bp+–
tRNA-ProTransfer RNA15,72615,79166 bp−–
D-loopControl region15,792363910 bp–38.1%

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