Boselaphus tragocamelus
Nilgai
GC content
39.19%
Whole genome
Non-coding
947 bp
Including the D-loop
Where Nilgai sits among 2,335 species
Whole-genome GC content against maximum lifespan. Nilgai has the 818th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,322 bp
- GC skew (G − C) / (G + C)
- −0.330
- AT skew (A − T) / (A + T)
- +0.114
Life history
- Maximum lifespan
- 21.7 years
- Adult weight
- 180 kg
- Birth weight
- 5.9 kg
- Female sexual maturity
- 2.2 years
- Gestation or incubation
- 255 days
- Litter or clutch size
- 1.5
- Litters per year
- 1
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01911)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- high, large sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,322 bp
Protein-coding11,336 bp
12S rRNA956 bp
16S rRNA1,574 bp
All tRNA1,513 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 957 bp | 40.75% | −0.421 | +0.104 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 36.18% | −0.512 | +0.140 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 40.32% | −0.210 | −0.002 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 38.89% | −0.308 | +0.144 | |||||
| ATP8ATP synthase F0 subunit 8 | 201 bp | 32.84% | −0.636 | +0.215 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 40.38% | −0.462 | +0.069 | |||||
| COX3Cytochrome c oxidase subunit III | 781 bp | 43.79% | −0.316 | −0.034 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 40.46% | −0.457 | +0.078 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 37.04% | −0.327 | −0.005 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 38.97% | −0.441 | +0.065 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,821 bp | 39.70% | −0.474 | +0.115 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 34.28% | −0.613 | +0.314 | |||||
| CYTBCytochrome b | 1,140 bp | 41.75% | −0.370 | +0.105 | |||||
| 12S rRNA12S ribosomal RNA | 956 bp | 39.23% | −0.115 | +0.212 | |||||
| 16S rRNA16S ribosomal RNA | 1,574 bp | 38.25% | −0.123 | +0.257 |
Codon usage
Counts per codon, darker is more frequent3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU108
UUC133
Leu L15.6%
UUA95
UUG17
CUU52
CUC100
CUA298
CUG30
Ile I8.8%
AUU176
AUC157
Met M7.2%
AUA244
AUG31
Val V4.8%
GUU32
GUC48
GUA86
GUG15
Ser S7.4%
UCU51
UCC67
UCA100
UCG6
AGU15
AGC43
Pro P5.1%
CCU42
CCC61
CCA86
CCG4
Thr T8.2%
ACU62
ACC77
ACA163
ACG8
Ala A6.4%
GCU39
GCC94
GCA105
GCG4
Tyr Y3.4%
UAU52
UAC78
His H2.5%
CAU26
CAC68
Gln Q2.3%
CAA79
CAG10
Asn N4.3%
AAU50
AAC115
Lys K2.5%
AAA88
AAG8
Asp D1.7%
GAU26
GAC39
Glu E2.6%
GAA77
GAG20
Cys C0.6%
UGU10
UGC13
Trp W2.7%
UGA92
UGG12
Arg R1.7%
CGU5
CGC13
CGA44
CGG1
Gly G5.7%
GGU29
GGC55
GGA104
GGG27
Stop 0.2%
UAA8
UAG0
AGA1
AGG0
Genome map
37 annotated features in NC_020614.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (39.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,025 | 956 bp | + | 39.2% |
| tRNA-Val | Transfer RNA | 1,026 | 1,092 | 67 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,093 | 2,666 | 1,574 bp | + | 38.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,667 | 2,741 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,744 | 3,700 | 957 bp | + | 40.8% |
| tRNA-Ile | Transfer RNA | 3,700 | 3,768 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,766 | 3,838 | 73 bp | − | – |
| tRNA-Met | Transfer RNA | 3,841 | 3,909 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,910 | 4,951 | 1,042 bp | + | 36.2% |
| tRNA-Trp | Transfer RNA | 4,952 | 5,018 | 67 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,020 | 5,088 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,090 | 5,162 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,195 | 5,261 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,262 | 5,329 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,331 | 6,875 | 1,545 bp | + | 40.3% |
| tRNA-Ser (UCN) | Transfer RNA | 6,873 | 6,943 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,948 | 7,016 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,018 | 7,701 | 684 bp | + | 38.9% |
| tRNA-Lys | Transfer RNA | 7,705 | 7,772 | 68 bp | + | – |
| ATP8 | Protein-coding gene | 7,774 | 7,974 | 201 bp | + | 32.8% |
| ATP6 | Protein-coding gene | 7,935 | 8,615 | 681 bp | + | 40.4% |
| COX3 | Protein-coding gene | 8,615 | 9,395 | 781 bp | + | 43.8% |
| tRNA-Gly | Transfer RNA | 9,399 | 9,467 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,468 | 9,813 | 346 bp | + | 40.5% |
| tRNA-Arg | Transfer RNA | 9,815 | 9,883 | 69 bp | + | – |
| ND4L | Protein-coding gene | 9,884 | 10,180 | 297 bp | + | 37.0% |
| ND4 | Protein-coding gene | 10,174 | 11,551 | 1,378 bp | + | 39.0% |
| tRNA-His | Transfer RNA | 11,552 | 11,621 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,622 | 11,681 | 60 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,683 | 11,752 | 70 bp | + | – |
| ND5 | Protein-coding gene | 11,753 | 13,573 | 1,821 bp | + | 39.7% |
| ND6 | Protein-coding gene | 13,557 | 14,084 | 528 bp | − | 34.3% |
| tRNA-Glu | Transfer RNA | 14,085 | 14,153 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,158 | 15,297 | 1,140 bp | + | 41.8% |
| tRNA-Thr | Transfer RNA | 15,302 | 15,371 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,371 | 15,436 | 66 bp | − | – |