MitoAge

Budorcas taxicolor

Takin

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Maximum lifespan
21.9 yr
AnAge record
mtDNA size
16,667 bp
RefSeq NC_013069.1
GC content
39.17%
Whole genome
Non-coding
1,294 bp
D-loop 1,235 bp

Where Takin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Takin has the 802nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Takin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,667 bp
GC skew (G − C) / (G + C)
−0.343
AT skew (A − T) / (A + T)
+0.113

Life history

Maximum lifespan
21.9 years
Adult weight
180 kg
Birth weight
6 kg
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
210 days
Litter or clutch size
1
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01916)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,667 bp
Protein-coding11,338 bp
12S rRNA955 bp
16S rRNA1,574 bp
All tRNA1,509 bp
D-loop1,235 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp32.4%28.3%10.7%28.6%39.23%−0.456+0.067
ND2NADH dehydrogenase subunit 21,042 bp38.1%26.7%7.5%27.7%35.22%−0.575+0.176
COX1Cytochrome c oxidase subunit I1,545 bp29.1%30.0%16.2%24.7%40.91%−0.209−0.014
COX2Cytochrome c oxidase subunit II684 bp35.1%26.3%13.5%25.1%38.60%−0.303+0.143
ATP8ATP synthase F0 subunit 8201 bp40.3%27.4%7.5%24.9%32.34%−0.538+0.191
ATP6ATP synthase F0 subunit 6681 bp32.3%28.3%11.2%28.2%39.35%−0.433+0.065
COX3Cytochrome c oxidase subunit III784 bp26.9%27.2%14.0%31.9%45.92%−0.389−0.005
ND3NADH dehydrogenase subunit 3346 bp31.2%28.0%11.0%29.8%40.75%−0.461+0.054
ND4LNADH dehydrogenase subunit 4L297 bp30.0%30.6%13.5%25.9%39.39%−0.316−0.011
ND4NADH dehydrogenase subunit 41,378 bp32.4%27.9%10.4%29.2%39.62%−0.473+0.075
ND5NADH dehydrogenase subunit 51,821 bp34.3%27.4%9.4%28.9%38.33%−0.507+0.111
ND6NADH dehydrogenase subunit 6528 bp42.6%21.4%6.8%29.2%35.99%−0.621+0.331
CYTBCytochrome b1,140 bp32.1%26.2%12.5%29.1%41.67%−0.398+0.101
12S rRNA12S ribosomal RNA955 bp35.8%20.8%18.6%24.7%43.35%−0.140+0.264
16S rRNA16S ribosomal RNA1,574 bp37.7%24.1%16.9%21.3%38.25%−0.116+0.220
D-loopControl region (D-loop)1,235 bp32.9%29.5%13.7%24.0%37.65%−0.273+0.055

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU102
UUC133
Leu L15.7%
UUA118
UUG15
CUU73
CUC109
CUA258
CUG24
Ile I9.3%
AUU185
AUC168
Met M6.8%
AUA211
AUG46
Val V4.3%
GUU35
GUC26
GUA86
GUG15
Ser S7.3%
UCU38
UCC79
UCA101
UCG5
AGU16
AGC39
Pro P5.1%
CCU37
CCC65
CCA88
CCG3
Thr T8.9%
ACU55
ACC102
ACA164
ACG16
Ala A6.1%
GCU43
GCC82
GCA106
GCG1
Tyr Y3.5%
UAU62
UAC72
His H2.5%
CAU22
CAC72
Gln Q2.3%
CAA82
CAG7
Asn N4.4%
AAU57
AAC111
Lys K2.6%
AAA88
AAG10
Asp D1.8%
GAU23
GAC44
Glu E2.5%
GAA81
GAG14
Cys C0.6%
UGU4
UGC18
Trp W2.7%
UGA95
UGG9
Arg R1.7%
CGU8
CGC13
CGA39
CGG4
Gly G5.6%
GGU22
GGC62
GGA109
GGG19
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_013069.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,023955 bp+43.4%
tRNA-ValTransfer RNA1,0241,09067 bp+–
16S rRNARibosomal RNA1,0912,6641,574 bp+38.3%
tRNA-Leu (UUR)Transfer RNA2,6652,73975 bp+–
ND1Protein-coding gene2,7423,697956 bp+39.2%
tRNA-IleTransfer RNA3,6983,76669 bp+–
tRNA-GlnTransfer RNA3,7643,83572 bp−–
tRNA-MetTransfer RNA3,8383,90669 bp+–
ND2Protein-coding gene3,9074,9481,042 bp+35.2%
tRNA-TrpTransfer RNA4,9495,01567 bp+–
tRNA-AlaTransfer RNA5,0175,08569 bp−–
tRNA-AsnTransfer RNA5,0875,15973 bp−–
tRNA-CysTransfer RNA5,1925,25968 bp−–
tRNA-TyrTransfer RNA5,2605,32768 bp−–
COX1Protein-coding gene5,3296,8731,545 bp+40.9%
tRNA-Ser (UCN)Transfer RNA6,8716,93969 bp−–
tRNA-AspTransfer RNA6,9477,01468 bp+–
COX2Protein-coding gene7,0167,699684 bp+38.6%
tRNA-LysTransfer RNA7,7027,76968 bp+–
ATP8Protein-coding gene7,7717,971201 bp+32.3%
ATP6Protein-coding gene7,9328,612681 bp+39.4%
COX3Protein-coding gene8,6129,395784 bp+45.9%
tRNA-GlyTransfer RNA9,3969,46469 bp+–
ND3Protein-coding gene9,4659,810346 bp+40.8%
tRNA-ArgTransfer RNA9,8129,88069 bp+–
ND4LProtein-coding gene9,88110,177297 bp+39.4%
ND4Protein-coding gene10,17111,5481,378 bp+39.6%
tRNA-HisTransfer RNA11,54911,61870 bp+–
tRNA-Ser (AGY)Transfer RNA11,61911,67860 bp+–
tRNA-Leu (CUN)Transfer RNA11,68011,74970 bp+–
ND5Protein-coding gene11,75013,5701,821 bp+38.3%
ND6Protein-coding gene13,55414,081528 bp−36.0%
tRNA-GluTransfer RNA14,08214,15069 bp−–
CYTBProtein-coding gene14,15515,2941,140 bp+41.7%
tRNA-ThrTransfer RNA15,29815,36770 bp+–
tRNA-ProTransfer RNA15,36715,43266 bp−–
D-loopControl region15,43316,6671,235 bp–37.7%

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