Capra falconeri

Markhor

Maximum lifespan

19.1 yr

AnAge record

mtDNA size

16,640 bp

RefSeq NC_020622.1

GC content

39.23%

Whole genome

Non-coding

1,269 bp

D-loop 1,027 bp

Where Markhor sits among 2,335 species

Whole-genome GC content against maximum lifespan. Markhor has the 972nd longest lifespan of them.

This species
Other mammals
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,640 bp

GC skew (G − C) / (G + C): −0.327
AT skew (A − T) / (A + T): +0.100

Life history

Maximum lifespan: 19.1 years
Adult weight: 41 kg
Female sexual maturity: 2 years
Gestation or incubation: 163 days
Litter or clutch size: 2

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01919)

About this record

Lifespan source: AnAge build 15
Based on: an animal in captivity
Data quality: high, large sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,640 bp

Protein-coding11,335 bp

12S rRNA956 bp

16S rRNA1,572 bp

All tRNA1,511 bp

D-loop1,027 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Capra falconeri genes

ND1NADH dehydrogenase subunit 1	956 bp	32.2%	27.6%	11.1%	29.0%	40.11%	−0.446	+0.077
ND2NADH dehydrogenase subunit 2	1,042 bp	37.1%	27.3%	7.6%	28.0%	35.61%	−0.574	+0.154
COX1Cytochrome c oxidase subunit I	1,545 bp	28.8%	29.2%	16.4%	25.6%	41.97%	−0.219	−0.007
COX2Cytochrome c oxidase subunit II	684 bp	34.8%	27.8%	13.7%	23.7%	37.43%	−0.266	+0.112
ATP8ATP synthase F0 subunit 8	198 bp	38.9%	28.3%	7.6%	25.3%	32.83%	−0.538	+0.158
ATP6ATP synthase F0 subunit 6	681 bp	32.0%	27.3%	10.6%	29.4%	40.24%	−0.471	+0.079
COX3Cytochrome c oxidase subunit III	784 bp	26.3%	30.9%	14.9%	27.9%	42.86%	−0.304	−0.080
ND3NADH dehydrogenase subunit 3	346 bp	31.2%	28.9%	11.3%	28.6%	39.88%	−0.435	+0.038
ND4LNADH dehydrogenase subunit 4L	297 bp	30.6%	30.3%	12.8%	26.3%	39.06%	−0.345	+0.006
ND4NADH dehydrogenase subunit 4	1,378 bp	31.8%	28.4%	10.8%	29.0%	39.84%	−0.457	+0.057
ND5NADH dehydrogenase subunit 5	1,821 bp	33.4%	27.3%	10.8%	28.5%	39.32%	−0.450	+0.100
ND6NADH dehydrogenase subunit 6	528 bp	43.6%	21.6%	6.3%	28.6%	34.85%	−0.641	+0.337
CYTBCytochrome b	1,140 bp	31.8%	26.8%	13.0%	28.3%	41.35%	−0.372	+0.087
12S rRNA12S ribosomal RNA	956 bp	36.5%	22.3%	18.1%	23.1%	41.21%	−0.122	+0.242
16S rRNA16S ribosomal RNA	1,572 bp	37.2%	24.7%	17.5%	20.7%	38.17%	−0.083	+0.202
D-loopControl region (D-loop)	1,027 bp	31.5%	28.6%	15.3%	24.6%	39.92%	−0.234	+0.047

Codon usage

Counts per codon, darker is more frequent

Gene

3,790 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%

UUU110

UUC134

Leu L15.7%

UUA107

UUG13

CUU75

CUC104

CUA270

CUG25

Ile I8.9%

AUU188

AUC149

Met M6.8%

AUA213

AUG43

Val V4.8%

GUU45

GUC40

GUA79

GUG17

Ser S7.1%

UCU47

UCC58

UCA99

UCG12

AGU13

AGC40

Pro P5.1%

CCU35

CCC70

CCA87

CCG2

Thr T8.4%

ACU54

ACC90

ACA165

ACG8

Ala A6.5%

GCU43

GCC89

GCA108

GCG6

Tyr Y3.5%

UAU65

UAC66

His H2.6%

CAU30

CAC68

Gln Q2.3%

CAA79

CAG9

Asn N4.3%

AAU47

AAC115

Lys K2.6%

AAA92

AAG6

Asp D1.8%

GAU22

GAC45

Glu E2.5%

GAA77

GAG18

Cys C0.6%

UGU6

UGC17

Trp W2.7%

UGA98

UGG6

Arg R1.7%

CGU9

CGC12

CGA40

CGG3

Gly G5.6%

GGU31

GGC55

GGA104

GGG24

Stop 0.2%

UAA5

UAG2

AGA1

AGG0

Genome map

38 annotated features in NC_020622.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (39.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Capra falconeri (NC_020622.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,024	956 bp	+	41.2%
tRNA-Val	Transfer RNA	1,025	1,091	67 bp	+	–
16S rRNA	Ribosomal RNA	1,092	2,663	1,572 bp	+	38.2%
tRNA-Leu (UUR)	Transfer RNA	2,664	2,738	75 bp	+	–
ND1	Protein-coding gene	2,741	3,696	956 bp	+	40.1%
tRNA-Ile	Transfer RNA	3,697	3,765	69 bp	+	–
tRNA-Gln	Transfer RNA	3,763	3,834	72 bp	−	–
tRNA-Met	Transfer RNA	3,837	3,905	69 bp	+	–
ND2	Protein-coding gene	3,906	4,947	1,042 bp	+	35.6%
tRNA-Trp	Transfer RNA	4,948	5,014	67 bp	+	–
tRNA-Ala	Transfer RNA	5,016	5,084	69 bp	−	–
tRNA-Asn	Transfer RNA	5,086	5,158	73 bp	−	–
tRNA-Cys	Transfer RNA	5,191	5,258	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,259	5,326	68 bp	−	–
COX1	Protein-coding gene	5,328	6,872	1,545 bp	+	42.0%
tRNA-Ser (UCN)	Transfer RNA	6,870	6,940	71 bp	−	–
tRNA-Asp	Transfer RNA	6,946	7,013	68 bp	+	–
COX2	Protein-coding gene	7,015	7,698	684 bp	+	37.4%
tRNA-Lys	Transfer RNA	7,702	7,768	67 bp	+	–
ATP8	Protein-coding gene	7,770	7,967	198 bp	+	32.8%
ATP6	Protein-coding gene	7,928	8,608	681 bp	+	40.2%
COX3	Protein-coding gene	8,608	9,391	784 bp	+	42.9%
tRNA-Gly	Transfer RNA	9,392	9,460	69 bp	+	–
ND3	Protein-coding gene	9,461	9,806	346 bp	+	39.9%
tRNA-Arg	Transfer RNA	9,807	9,876	70 bp	+	–
ND4L	Protein-coding gene	9,877	10,173	297 bp	+	39.1%
ND4	Protein-coding gene	10,167	11,544	1,378 bp	+	39.8%
tRNA-His	Transfer RNA	11,545	11,614	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,615	11,674	60 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,676	11,745	70 bp	+	–
ND5	Protein-coding gene	11,746	13,566	1,821 bp	+	39.3%
ND6	Protein-coding gene	13,550	14,077	528 bp	−	34.9%
tRNA-Glu	Transfer RNA	14,078	14,146	69 bp	−	–
CYTB	Protein-coding gene	14,151	15,290	1,140 bp	+	41.4%
tRNA-Thr	Transfer RNA	15,294	15,363	70 bp	+	–
tRNA-Pro	Transfer RNA	15,363	15,428	66 bp	−	–
D-loop	Control region	15,429	16,455	1,027 bp	–	39.9%