MitoAge

Capra hircus

Domestic goat

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Maximum lifespan
20.8 yr
AnAge record
mtDNA size
16,643 bp
RefSeq NC_005044.2
GC content
39.13%
Whole genome
Non-coding
1,660 bp
D-loop 1,213 bp

Where Domestic goat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Domestic goat has the 862nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Domestic goat
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,643 bp
GC skew (G − C) / (G + C)
−0.331
AT skew (A − T) / (A + T)
+0.103

Life history

Maximum lifespan
20.8 years
Adult weight
61 kg
Birth weight
2.3 kg
Body temperature
39.3 °C
Female sexual maturity
406 days
Male sexual maturity
685 days
Gestation or incubation
155 days
Litter or clutch size
1.5
Litters per year
1
Postnatal growth rate
0.0041 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01920)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,643 bp
Protein-coding11,335 bp
12S rRNA569 bp
16S rRNA1,573 bp
All tRNA1,509 bp
D-loop1,213 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.8%28.7%11.5%28.0%39.54%−0.418+0.052
ND2NADH dehydrogenase subunit 21,042 bp37.1%26.9%7.7%28.3%35.99%−0.573+0.160
COX1Cytochrome c oxidase subunit I1,545 bp29.1%29.4%16.1%25.4%41.49%−0.226−0.004
COX2Cytochrome c oxidase subunit II684 bp34.9%27.6%13.6%23.8%37.43%−0.273+0.117
ATP8ATP synthase F0 subunit 8198 bp39.9%27.8%7.1%25.3%32.32%−0.563+0.179
ATP6ATP synthase F0 subunit 6681 bp32.6%28.0%10.6%28.8%39.35%−0.463+0.075
COX3Cytochrome c oxidase subunit III784 bp26.7%30.0%14.5%28.8%43.37%−0.329−0.059
ND3NADH dehydrogenase subunit 3346 bp31.2%29.8%11.3%27.7%39.02%−0.422+0.024
ND4LNADH dehydrogenase subunit 4L297 bp31.6%31.0%11.8%25.6%37.37%−0.369+0.011
ND4NADH dehydrogenase subunit 41,378 bp32.1%28.4%10.5%29.0%39.55%−0.468+0.061
ND5NADH dehydrogenase subunit 51,821 bp33.5%27.2%10.7%28.6%39.32%−0.455+0.104
ND6NADH dehydrogenase subunit 6528 bp42.2%21.6%7.4%28.8%36.17%−0.592+0.323
CYTBCytochrome b1,140 bp31.8%26.8%13.2%28.2%41.40%−0.364+0.087
12S rRNA12S ribosomal RNA569 bp35.3%21.6%17.9%25.1%43.06%−0.167+0.241
16S rRNA16S ribosomal RNA1,573 bp37.5%24.8%17.2%20.5%37.70%−0.089+0.204
D-loopControl region (D-loop)1,213 bp31.3%28.6%13.9%26.1%40.07%−0.305+0.045

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU109
UUC134
Leu L15.8%
UUA108
UUG10
CUU75
CUC108
CUA276
CUG23
Ile I8.8%
AUU185
AUC149
Met M6.8%
AUA215
AUG42
Val V4.7%
GUU43
GUC40
GUA83
GUG13
Ser S7.1%
UCU46
UCC58
UCA102
UCG10
AGU17
AGC38
Pro P5.1%
CCU32
CCC73
CCA87
CCG1
Thr T8.5%
ACU54
ACC91
ACA169
ACG9
Ala A6.5%
GCU46
GCC86
GCA107
GCG6
Tyr Y3.5%
UAU69
UAC63
His H2.6%
CAU30
CAC67
Gln Q2.3%
CAA80
CAG8
Asn N4.3%
AAU52
AAC110
Lys K2.6%
AAA90
AAG7
Asp D1.8%
GAU22
GAC46
Glu E2.5%
GAA77
GAG19
Cys C0.6%
UGU5
UGC17
Trp W2.7%
UGA99
UGG5
Arg R1.7%
CGU9
CGC12
CGA39
CGG4
Gly G5.7%
GGU33
GGC52
GGA104
GGG26
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_005044.2

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA69637569 bp+43.1%
tRNA-ValTransfer RNA1,0251,09167 bp+–
16S rRNARibosomal RNA1,0922,6641,573 bp+37.7%
tRNA-Leu (UUR)Transfer RNA2,6652,73975 bp+–
ND1Protein-coding gene2,7423,697956 bp+39.5%
tRNA-IleTransfer RNA3,6983,76669 bp+–
tRNA-GlnTransfer RNA3,7643,83572 bp−–
tRNA-MetTransfer RNA3,8383,90669 bp+–
ND2Protein-coding gene3,9074,9481,042 bp+36.0%
tRNA-TrpTransfer RNA4,9495,01567 bp+–
tRNA-AlaTransfer RNA5,0175,08569 bp−–
tRNA-AsnTransfer RNA5,0875,15973 bp−–
tRNA-CysTransfer RNA5,1925,25968 bp−–
tRNA-TyrTransfer RNA5,2605,32768 bp−–
COX1Protein-coding gene5,3296,8731,545 bp+41.5%
tRNA-Ser (UCN)Transfer RNA6,8716,93969 bp−–
tRNA-AspTransfer RNA6,9477,01468 bp+–
COX2Protein-coding gene7,0167,699684 bp+37.4%
tRNA-LysTransfer RNA7,7037,76967 bp+–
ATP8Protein-coding gene7,7717,968198 bp+32.3%
ATP6Protein-coding gene7,9298,609681 bp+39.4%
COX3Protein-coding gene8,6099,392784 bp+43.4%
tRNA-GlyTransfer RNA9,3939,46169 bp+–
ND3Protein-coding gene9,4629,807346 bp+39.0%
tRNA-ArgTransfer RNA9,8099,87769 bp+–
ND4LProtein-coding gene9,87810,174297 bp+37.4%
ND4Protein-coding gene10,16811,5451,378 bp+39.6%
tRNA-HisTransfer RNA11,54611,61671 bp+–
tRNA-Ser (AGY)Transfer RNA11,61711,67660 bp+–
tRNA-Leu (CUN)Transfer RNA11,67811,74770 bp+–
ND5Protein-coding gene11,74813,5681,821 bp+39.3%
ND6Protein-coding gene13,55214,079528 bp−36.2%
tRNA-GluTransfer RNA14,08014,14869 bp−–
CYTBProtein-coding gene14,15315,2921,140 bp+41.4%
tRNA-ThrTransfer RNA15,29615,36570 bp+–
tRNA-ProTransfer RNA15,36515,43066 bp−–
D-loopControl region15,43116,6431,213 bp–40.1%

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