MitoAge

Capra nubiana

Nubian ibex

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Maximum lifespan
22.4 yr
AnAge record
mtDNA size
16,705 bp
RefSeq NC_020624.1
GC content
39.43%
Whole genome
Non-coding
1,332 bp
D-loop 1,099 bp

Where Nubian ibex sits among 2,335 species

Whole-genome GC content against maximum lifespan. Nubian ibex has the 769th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Nubian ibex
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,705 bp
GC skew (G − C) / (G + C)
−0.334
AT skew (A − T) / (A + T)
+0.108

Life history

Maximum lifespan
22.4 years
Adult weight
46.3 kg
Female sexual maturity
2.2 years
Male sexual maturity
3.4 years
Gestation or incubation
150 days
Litter or clutch size
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01922)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,705 bp
Protein-coding11,335 bp
12S rRNA956 bp
16S rRNA1,574 bp
All tRNA1,511 bp
D-loop1,099 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.5%27.4%11.5%29.3%40.92%−0.436+0.069
ND2NADH dehydrogenase subunit 21,042 bp37.0%26.3%7.7%29.0%36.66%−0.581+0.170
COX1Cytochrome c oxidase subunit I1,545 bp29.0%29.6%16.0%25.4%41.36%−0.227−0.011
COX2Cytochrome c oxidase subunit II684 bp34.6%27.2%13.9%24.3%38.16%−0.272+0.121
ATP8ATP synthase F0 subunit 8198 bp40.9%26.8%6.6%25.8%32.32%−0.594+0.209
ATP6ATP synthase F0 subunit 6681 bp32.7%27.9%10.6%28.8%39.35%−0.463+0.080
COX3Cytochrome c oxidase subunit III784 bp26.5%29.5%14.5%29.0%43.72%−0.331−0.052
ND3NADH dehydrogenase subunit 3346 bp31.5%28.6%10.7%29.2%39.88%−0.464+0.048
ND4LNADH dehydrogenase subunit 4L297 bp32.0%30.6%11.4%25.9%37.37%−0.387+0.022
ND4NADH dehydrogenase subunit 41,378 bp31.7%28.0%10.9%29.4%40.28%−0.459+0.062
ND5NADH dehydrogenase subunit 51,821 bp33.7%27.0%10.5%28.8%39.37%−0.464+0.111
ND6NADH dehydrogenase subunit 6528 bp42.6%22.3%7.0%27.5%34.67%−0.593+0.312
CYTBCytochrome b1,140 bp32.0%26.1%12.8%29.0%41.84%−0.388+0.101
12S rRNA12S ribosomal RNA956 bp36.4%22.0%18.1%23.5%41.63%−0.131+0.247
16S rRNA16S ribosomal RNA1,574 bp37.6%24.4%17.2%20.8%37.99%−0.094+0.213
D-loopControl region (D-loop)1,099 bp32.0%27.9%15.4%24.7%40.04%−0.232+0.068

Codon usage

Counts per codon, darker is more frequent

3,788 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU101
UUC142
Leu L15.6%
UUA111
UUG7
CUU74
CUC109
CUA267
CUG24
Ile I9.0%
AUU185
AUC157
Met M6.6%
AUA211
AUG38
Val V4.7%
GUU41
GUC40
GUA84
GUG12
Ser S7.2%
UCU41
UCC66
UCA101
UCG6
AGU15
AGC42
Pro P5.1%
CCU34
CCC72
CCA84
CCG4
Thr T8.6%
ACU51
ACC93
ACA170
ACG11
Ala A6.5%
GCU39
GCC93
GCA111
GCG3
Tyr Y3.4%
UAU68
UAC60
His H2.6%
CAU28
CAC71
Gln Q2.3%
CAA77
CAG11
Asn N4.3%
AAU52
AAC109
Lys K2.6%
AAA90
AAG7
Asp D1.8%
GAU18
GAC49
Glu E2.5%
GAA81
GAG14
Cys C0.6%
UGU5
UGC18
Trp W2.7%
UGA97
UGG7
Arg R1.7%
CGU11
CGC10
CGA39
CGG5
Gly G5.6%
GGU29
GGC57
GGA108
GGG20
Stop 0.2%
UAA6
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_020624.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,024956 bp+41.6%
tRNA-ValTransfer RNA1,0251,09167 bp+–
16S rRNARibosomal RNA1,0922,6651,574 bp+38.0%
tRNA-Leu (UUR)Transfer RNA2,6662,74075 bp+–
ND1Protein-coding gene2,7433,698956 bp+40.9%
tRNA-IleTransfer RNA3,6993,76769 bp+–
tRNA-GlnTransfer RNA3,7653,83672 bp−–
tRNA-MetTransfer RNA3,8393,90769 bp+–
ND2Protein-coding gene3,9084,9491,042 bp+36.7%
tRNA-TrpTransfer RNA4,9505,01667 bp+–
tRNA-AlaTransfer RNA5,0185,08669 bp−–
tRNA-AsnTransfer RNA5,0885,16073 bp−–
tRNA-CysTransfer RNA5,1935,26068 bp−–
tRNA-TyrTransfer RNA5,2615,32868 bp−–
COX1Protein-coding gene5,3306,8741,545 bp+41.4%
tRNA-Ser (UCN)Transfer RNA6,8726,94271 bp−–
tRNA-AspTransfer RNA6,9487,01568 bp+–
COX2Protein-coding gene7,0177,700684 bp+38.2%
tRNA-LysTransfer RNA7,7047,77067 bp+–
ATP8Protein-coding gene7,7727,969198 bp+32.3%
ATP6Protein-coding gene7,9308,610681 bp+39.4%
COX3Protein-coding gene8,6109,393784 bp+43.7%
tRNA-GlyTransfer RNA9,3949,46269 bp+–
ND3Protein-coding gene9,4639,808346 bp+39.9%
tRNA-ArgTransfer RNA9,8099,87870 bp+–
ND4LProtein-coding gene9,87910,175297 bp+37.4%
ND4Protein-coding gene10,16911,5461,378 bp+40.3%
tRNA-HisTransfer RNA11,54711,61670 bp+–
tRNA-Ser (AGY)Transfer RNA11,61711,67660 bp+–
tRNA-Leu (CUN)Transfer RNA11,67811,74770 bp+–
ND5Protein-coding gene11,74813,5681,821 bp+39.4%
ND6Protein-coding gene13,55214,079528 bp−34.7%
tRNA-GluTransfer RNA14,08014,14869 bp−–
CYTBProtein-coding gene14,15315,2921,140 bp+41.8%
tRNA-ThrTransfer RNA15,29615,36570 bp+–
tRNA-ProTransfer RNA15,36515,43066 bp−–
D-loopControl region15,43116,5291,099 bp–40.0%

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