MitoAge

Capreolus capreolus

Western roe deer

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Maximum lifespan
17.5 yr
AnAge record
mtDNA size
16,358 bp
RefSeq NC_020684.1
GC content
36.55%
Whole genome
Non-coding
987 bp
D-loop 722 bp

Where Western roe deer sits among 2,335 species

Whole-genome GC content against maximum lifespan. Western roe deer has the 1,077th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Western roe deer
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,358 bp
GC skew (G − C) / (G + C)
−0.272
AT skew (A − T) / (A + T)
+0.054

Life history

Maximum lifespan
17.5 years
Adult weight
21.7 kg
Birth weight
1 kg
Basal metabolic rate
46.347 W
Body temperature
38 °C
Female sexual maturity
413 days
Male sexual maturity
655 days
Gestation or incubation
153 days
Litter or clutch size
1.6
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02018)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,358 bp
Protein-coding11,338 bp
12S rRNA955 bp
16S rRNA1,569 bp
All tRNA1,512 bp
D-loop722 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp32.0%31.8%11.6%24.6%36.19%−0.358+0.003
ND2NADH dehydrogenase subunit 21,042 bp36.6%31.4%8.6%23.4%32.05%−0.461+0.076
COX1Cytochrome c oxidase subunit I1,545 bp29.1%34.0%16.0%20.9%36.89%−0.133−0.079
COX2Cytochrome c oxidase subunit II684 bp34.8%28.9%13.7%22.5%36.26%−0.242+0.092
ATP8ATP synthase F0 subunit 8201 bp40.3%30.3%8.0%21.4%29.35%−0.458+0.141
ATP6ATP synthase F0 subunit 6681 bp30.8%32.7%11.9%24.5%36.42%−0.347−0.030
COX3Cytochrome c oxidase subunit III784 bp26.9%30.4%14.2%28.2%42.51%−0.331−0.060
ND3NADH dehydrogenase subunit 3346 bp30.9%32.7%11.6%24.9%36.42%−0.365−0.027
ND4LNADH dehydrogenase subunit 4L297 bp30.6%33.7%13.1%22.6%35.69%−0.264−0.047
ND4NADH dehydrogenase subunit 41,378 bp31.3%32.3%11.4%25.0%36.36%−0.373−0.015
ND5NADH dehydrogenase subunit 51,821 bp33.7%31.7%10.7%23.8%34.54%−0.380+0.030
ND6NADH dehydrogenase subunit 6528 bp41.5%24.6%7.8%26.1%33.90%−0.542+0.255
CYTBCytochrome b1,140 bp31.7%29.1%12.7%26.5%39.21%−0.351+0.042
12S rRNA12S ribosomal RNA955 bp37.3%23.6%17.7%21.5%39.16%−0.096+0.225
16S rRNA16S ribosomal RNA1,569 bp37.9%25.3%17.1%19.8%36.84%−0.073+0.199
D-loopControl region (D-loop)722 bp30.1%30.6%17.0%22.3%39.34%−0.134−0.009

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.7%
UUU155
UUC99
Leu L15.3%
UUA166
UUG20
CUU84
CUC68
CUA215
CUG27
Ile I8.9%
AUU240
AUC97
Met M7.0%
AUA229
AUG37
Val V5.1%
GUU55
GUC40
GUA80
GUG17
Ser S7.6%
UCU61
UCC51
UCA110
UCG2
AGU24
AGC39
Pro P5.0%
CCU58
CCC42
CCA89
CCG2
Thr T8.0%
ACU81
ACC58
ACA157
ACG8
Ala A6.3%
GCU54
GCC72
GCA106
GCG7
Tyr Y3.4%
UAU78
UAC51
His H2.4%
CAU38
CAC53
Gln Q2.4%
CAA86
CAG7
Asn N4.3%
AAU81
AAC83
Lys K2.5%
AAA86
AAG10
Asp D1.7%
GAU36
GAC30
Glu E2.5%
GAA79
GAG17
Cys C0.7%
UGU8
UGC17
Trp W2.7%
UGA93
UGG10
Arg R1.6%
CGU7
CGC15
CGA34
CGG6
Gly G5.6%
GGU41
GGC57
GGA97
GGG18
Stop 0.2%
UAA6
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_020684.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,024955 bp+39.2%
tRNA-ValTransfer RNA1,0251,09268 bp+–
16S rRNARibosomal RNA1,0932,6611,569 bp+36.8%
tRNA-Leu (UUR)Transfer RNA2,6622,73675 bp+–
ND1Protein-coding gene2,7393,694956 bp+36.2%
tRNA-IleTransfer RNA3,6953,76369 bp+–
tRNA-GlnTransfer RNA3,7613,83272 bp−–
tRNA-MetTransfer RNA3,8353,90369 bp+–
ND2Protein-coding gene3,9044,9451,042 bp+32.1%
tRNA-TrpTransfer RNA4,9465,01368 bp+–
tRNA-AlaTransfer RNA5,0155,08369 bp−–
tRNA-AsnTransfer RNA5,0855,15773 bp−–
tRNA-CysTransfer RNA5,1905,25566 bp−–
tRNA-TyrTransfer RNA5,2565,32469 bp−–
COX1Protein-coding gene5,3266,8701,545 bp+36.9%
tRNA-Ser (UCN)Transfer RNA6,8686,93871 bp−–
tRNA-AspTransfer RNA6,9447,01269 bp+–
COX2Protein-coding gene7,0147,697684 bp+36.3%
tRNA-LysTransfer RNA7,7017,76767 bp+–
ATP8Protein-coding gene7,7697,969201 bp+29.4%
ATP6Protein-coding gene7,9308,610681 bp+36.4%
COX3Protein-coding gene8,6109,393784 bp+42.5%
tRNA-GlyTransfer RNA9,3949,46269 bp+–
ND3Protein-coding gene9,4639,808346 bp+36.4%
tRNA-ArgTransfer RNA9,8099,87769 bp+–
ND4LProtein-coding gene9,87810,174297 bp+35.7%
ND4Protein-coding gene10,16811,5451,378 bp+36.4%
tRNA-HisTransfer RNA11,54611,61469 bp+–
tRNA-Ser (AGY)Transfer RNA11,61511,67460 bp+–
tRNA-Leu (CUN)Transfer RNA11,67611,74570 bp+–
ND5Protein-coding gene11,74613,5661,821 bp+34.5%
ND6Protein-coding gene13,55014,077528 bp−33.9%
tRNA-GluTransfer RNA14,07814,14669 bp−–
CYTBProtein-coding gene14,15115,2901,140 bp+39.2%
tRNA-ThrTransfer RNA15,29415,36370 bp+–
tRNA-ProTransfer RNA15,36315,42866 bp−–
D-loopControl region15,43216,153722 bp–39.3%

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