Carcharhinus acronotus

Blacknose shark

Maximum lifespan

19 yr

AnAge record

mtDNA size

16,719 bp

RefSeq NC_024055.1

GC content

38.35%

Whole genome

Non-coding

1,132 bp

D-loop 1,076 bp

Where Blacknose shark sits among 2,335 species

Whole-genome GC content against maximum lifespan. Blacknose shark has the 976th longest lifespan of them.

This species
Other sharks and rays
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,719 bp

GC skew (G − C) / (G + C): −0.313
AT skew (A − T) / (A + T): +0.020

Life history

Maximum lifespan: 19 years
Adult weight: 10.4 kg
Female sexual maturity: 3.7 years
Male sexual maturity: 2.7 years
Litter or clutch size: 3.9

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01747)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,719 bp

Protein-coding11,407 bp

12S rRNA956 bp

16S rRNA1,673 bp

All tRNA1,551 bp

D-loop1,076 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Carcharhinus acronotus genes

ND1NADH dehydrogenase subunit 1	975 bp	30.1%	30.5%	11.1%	28.4%	39.49%	−0.439	−0.007
ND2NADH dehydrogenase subunit 2	1,045 bp	31.8%	29.0%	9.0%	30.2%	39.23%	−0.541	+0.046
COX1Cytochrome c oxidase subunit I	1,557 bp	27.6%	34.3%	15.3%	22.9%	38.15%	−0.199	−0.109
COX2Cytochrome c oxidase subunit II	691 bp	32.4%	30.4%	14.5%	22.7%	37.19%	−0.222	+0.032
ATP8ATP synthase F0 subunit 8	168 bp	38.7%	32.1%	6.0%	23.2%	29.17%	−0.592	+0.092
ATP6ATP synthase F0 subunit 6	683 bp	31.3%	32.8%	9.8%	26.1%	35.87%	−0.453	−0.023
COX3Cytochrome c oxidase subunit III	786 bp	28.0%	30.8%	15.5%	25.7%	41.22%	−0.247	−0.048
ND3NADH dehydrogenase subunit 3	349 bp	26.4%	33.8%	14.0%	25.8%	39.83%	−0.295	−0.124
ND4LNADH dehydrogenase subunit 4L	297 bp	25.3%	32.3%	11.8%	30.6%	42.42%	−0.444	−0.123
ND4NADH dehydrogenase subunit 4	1,381 bp	30.6%	30.2%	10.4%	28.9%	39.25%	−0.472	+0.006
ND5NADH dehydrogenase subunit 5	1,830 bp	31.4%	30.5%	9.8%	28.3%	38.14%	−0.484	+0.014
ND6NADH dehydrogenase subunit 6	522 bp	42.5%	19.9%	7.9%	29.7%	37.55%	−0.582	+0.362
CYTBCytochrome b	1,145 bp	28.0%	32.9%	12.0%	27.1%	39.04%	−0.387	−0.080
12S rRNA12S ribosomal RNA	956 bp	33.9%	24.4%	18.3%	23.4%	41.74%	−0.123	+0.163
16S rRNA16S ribosomal RNA	1,673 bp	36.2%	27.3%	16.5%	20.1%	36.58%	−0.098	+0.140
D-loopControl region (D-loop)	1,076 bp	31.7%	35.1%	13.6%	19.6%	33.18%	−0.182	−0.051

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%

UUU114

UUC129

Leu L17.3%

UUA189

UUG11

CUU139

CUC124

CUA186

CUG8

Ile I9.2%

AUU200

AUC149

Met M4.3%

AUA134

AUG29

Val V4.4%

GUU58

GUC28

GUA72

GUG8

Ser S7.1%

UCU50

UCC61

UCA100

UCG5

AGU22

AGC34

Pro P5.6%

CCU62

CCC46

CCA105

CCG2

Thr T7.6%

ACU84

ACC81

ACA122

ACG1

Ala A7.3%

GCU88

GCC90

GCA96

GCG5

Tyr Y3.1%

UAU78

UAC41

His H2.7%

CAU51

CAC52

Gln Q2.5%

CAA93

CAG1

Asn N4.0%

AAU56

AAC95

Lys K2.3%

AAA83

AAG3

Asp D1.9%

GAU36

GAC36

Glu E2.5%

GAA95

GAG2

Cys C0.6%

UGU12

UGC11

Trp W3.2%

UGA118

UGG5

Arg R1.9%

CGU16

CGC13

CGA43

CGG1

Gly G6.0%

GGU72

GGC44

GGA99

GGG12

Stop 0.2%

UAA6

UAG0

AGA0

AGG1

Genome map

38 annotated features in NC_024055.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (38.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Carcharhinus acronotus (NC_024055.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	70	70 bp	+	–
12S rRNA	Ribosomal RNA	71	1,026	956 bp	+	41.7%
tRNA-Val	Transfer RNA	1,027	1,098	72 bp	+	–
16S rRNA	Ribosomal RNA	1,099	2,771	1,673 bp	+	36.6%
tRNA-Leu (UUR)	Transfer RNA	2,772	2,846	75 bp	+	–
ND1	Protein-coding gene	2,847	3,821	975 bp	+	39.5%
tRNA-Ile	Transfer RNA	3,822	3,891	70 bp	+	–
tRNA-Gln	Transfer RNA	3,893	3,964	72 bp	−	–
tRNA-Met	Transfer RNA	3,964	4,032	69 bp	+	–
ND2	Protein-coding gene	4,033	5,077	1,045 bp	+	39.2%
tRNA-Trp	Transfer RNA	5,078	5,148	71 bp	+	–
tRNA-Ala	Transfer RNA	5,150	5,218	69 bp	−	–
tRNA-Asn	Transfer RNA	5,219	5,291	73 bp	−	–
tRNA-Cys	Transfer RNA	5,327	5,394	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,396	5,464	69 bp	−	–
COX1	Protein-coding gene	5,466	7,022	1,557 bp	+	38.2%
tRNA-Ser (UCN)	Transfer RNA	7,023	7,093	71 bp	−	–
tRNA-Asp	Transfer RNA	7,097	7,166	70 bp	+	–
COX2	Protein-coding gene	7,174	7,864	691 bp	+	37.2%
tRNA-Lys	Transfer RNA	7,865	7,938	74 bp	+	–
ATP8	Protein-coding gene	7,940	8,107	168 bp	+	29.2%
ATP6	Protein-coding gene	8,098	8,780	683 bp	+	35.9%
COX3	Protein-coding gene	8,781	9,566	786 bp	+	41.2%
tRNA-Gly	Transfer RNA	9,569	9,638	70 bp	+	–
ND3	Protein-coding gene	9,639	9,987	349 bp	+	39.8%
tRNA-Arg	Transfer RNA	9,988	10,057	70 bp	+	–
ND4L	Protein-coding gene	10,058	10,354	297 bp	+	42.4%
ND4	Protein-coding gene	10,348	11,728	1,381 bp	+	39.3%
tRNA-His	Transfer RNA	11,729	11,797	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,798	11,864	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,865	11,936	72 bp	+	–
ND5	Protein-coding gene	11,937	13,766	1,830 bp	+	38.1%
ND6	Protein-coding gene	13,762	14,283	522 bp	−	37.6%
tRNA-Glu	Transfer RNA	14,284	14,353	70 bp	−	–
CYTB	Protein-coding gene	14,356	15,500	1,145 bp	+	39.0%
tRNA-Thr	Transfer RNA	15,501	15,572	72 bp	+	–
tRNA-Pro	Transfer RNA	15,575	15,643	69 bp	−	–
D-loop	Control region	15,644	16,719	1,076 bp	–	33.2%