MitoAge

Carpodacus erythrinus

Common rosefinch

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Maximum lifespan
9 yr
AnAge record
mtDNA size
16,820 bp
RefSeq NC_025597.1
GC content
46.00%
Whole genome
Non-coding
1,338 bp
D-loop 1,240 bp

Where Common rosefinch sits among 2,335 species

Whole-genome GC content against maximum lifespan. Common rosefinch has the 1,656th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Common rosefinch
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,820 bp
GC skew (G − C) / (G + C)
−0.362
AT skew (A − T) / (A + T)
+0.118

Life history

Maximum lifespan
9 years
Adult weight
24 g
Basal metabolic rate
0.358 W
Female sexual maturity
365 days
Male sexual maturity
365 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00887)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,820 bp
Protein-coding11,378 bp
12S rRNA973 bp
16S rRNA1,598 bp
All tRNA1,542 bp
D-loop1,240 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp26.7%27.0%14.7%31.6%46.32%−0.364−0.006
ND2NADH dehydrogenase subunit 21,040 bp30.9%24.8%10.5%33.8%44.33%−0.527+0.109
COX1Cytochrome c oxidase subunit I1,551 bp27.3%25.0%17.3%30.3%47.65%−0.272+0.044
COX2Cytochrome c oxidase subunit II684 bp30.3%22.8%15.5%31.4%46.93%−0.340+0.141
ATP8ATP synthase F0 subunit 8168 bp28.0%26.2%7.1%38.7%45.83%−0.688+0.033
ATP6ATP synthase F0 subunit 6684 bp28.7%22.8%11.7%36.8%48.54%−0.518+0.114
COX3Cytochrome c oxidase subunit III784 bp26.8%23.3%15.7%34.2%49.87%−0.371+0.069
ND3NADH dehydrogenase subunit 3351 bp28.5%26.8%12.5%32.2%44.73%−0.439+0.031
ND4LNADH dehydrogenase subunit 4L297 bp27.6%26.6%11.8%34.0%45.79%−0.485+0.019
ND4NADH dehydrogenase subunit 41,378 bp30.2%22.8%11.4%35.6%47.03%−0.515+0.140
ND5NADH dehydrogenase subunit 51,818 bp30.7%22.8%12.1%34.4%46.54%−0.480+0.148
ND6NADH dehydrogenase subunit 6519 bp38.2%11.8%9.8%40.1%50.00%−0.606+0.529
CYTBCytochrome b1,143 bp27.6%24.7%13.6%34.1%47.77%−0.429+0.055
12S rRNA12S ribosomal RNA973 bp30.9%21.2%21.3%26.6%47.89%−0.112+0.187
16S rRNA16S ribosomal RNA1,598 bp34.6%21.9%19.9%23.6%43.49%−0.085+0.225
D-loopControl region (D-loop)1,240 bp29.0%28.7%13.7%28.5%42.26%−0.351+0.006

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU39
UUC182
Leu L17.7%
UUA56
UUG18
CUU70
CUC146
CUA318
CUG62
Ile I7.6%
AUU83
AUC204
Met M4.1%
AUA115
AUG41
Val V5.3%
GUU39
GUC59
GUA74
GUG30
Ser S7.7%
UCU44
UCC88
UCA87
UCG13
AGU8
AGC54
Pro P5.8%
CCU39
CCC73
CCA104
CCG5
Thr T8.2%
ACU47
ACC130
ACA125
ACG9
Ala A8.2%
GCU39
GCC166
GCA95
GCG13
Tyr Y2.9%
UAU28
UAC82
His H2.7%
CAU11
CAC90
Gln Q2.5%
CAA85
CAG9
Asn N3.5%
AAU19
AAC112
Lys K2.3%
AAA81
AAG5
Asp D1.7%
GAU12
GAC52
Glu E2.5%
GAA82
GAG12
Cys C0.7%
UGU4
UGC23
Trp W2.8%
UGA98
UGG8
Arg R1.9%
CGU8
CGC13
CGA46
CGG6
Gly G5.9%
GGU23
GGC67
GGA99
GGG36
Stop 0.3%
UAA6
UAG1
AGA2
AGG1

Genome map

38 annotated features in NC_025597.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,2401,240 bp–42.3%
tRNA-PheTransfer RNA1,2411,30868 bp+–
12S rRNARibosomal RNA1,3092,281973 bp+47.9%
tRNA-ValTransfer RNA2,2822,35170 bp+–
16S rRNARibosomal RNA2,3523,9491,598 bp+43.5%
tRNA-Leu (UUR)Transfer RNA3,9504,02475 bp+–
ND1Protein-coding gene4,0395,016978 bp+46.3%
tRNA-IleTransfer RNA5,0225,09574 bp+–
tRNA-GlnTransfer RNA5,0995,16971 bp−–
tRNA-MetTransfer RNA5,1695,23769 bp+–
ND2Protein-coding gene5,2386,2771,040 bp+44.3%
tRNA-TrpTransfer RNA6,2786,34871 bp+–
tRNA-AlaTransfer RNA6,3506,41869 bp−–
tRNA-AsnTransfer RNA6,4276,49973 bp−–
tRNA-CysTransfer RNA6,5006,56667 bp−–
tRNA-TyrTransfer RNA6,5666,63671 bp−–
COX1Protein-coding gene6,6388,1881,551 bp+47.7%
tRNA-Ser (UCN)Transfer RNA8,1808,25273 bp−–
tRNA-AspTransfer RNA8,2588,32669 bp+–
COX2Protein-coding gene8,3379,020684 bp+46.9%
tRNA-LysTransfer RNA9,0229,09069 bp+–
ATP8Protein-coding gene9,0929,259168 bp+45.8%
ATP6Protein-coding gene9,2509,933684 bp+48.5%
COX3Protein-coding gene9,94210,725784 bp+49.9%
tRNA-GlyTransfer RNA10,72610,79469 bp+–
ND3Protein-coding gene10,79511,145351 bp+44.7%
tRNA-ArgTransfer RNA11,14711,21670 bp+–
ND4LProtein-coding gene11,21811,514297 bp+45.8%
ND4Protein-coding gene11,50812,8851,378 bp+47.0%
tRNA-HisTransfer RNA12,88612,95570 bp+–
tRNA-Ser (AGY)Transfer RNA12,95613,02166 bp+–
tRNA-Leu (CUN)Transfer RNA13,02113,09171 bp+–
ND5Protein-coding gene13,09214,9091,818 bp+46.5%
CYTBProtein-coding gene14,91716,0591,143 bp+47.8%
tRNA-ThrTransfer RNA16,06316,13169 bp+–
tRNA-ProTransfer RNA16,15116,22070 bp−–
ND6Protein-coding gene16,23016,748519 bp−50.0%
tRNA-GluTransfer RNA16,75016,82071 bp−–

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