Chloris chloris
European greenfinch
GC content
44.87%
Whole genome
Non-coding
1,332 bp
D-loop 1,237 bp
Where European greenfinch sits among 2,335 species
Whole-genome GC content against maximum lifespan. European greenfinch has the 1,328th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,813 bp
- GC skew (G − C) / (G + C)
- −0.367
- AT skew (A − T) / (A + T)
- +0.111
Life history
- Maximum lifespan
- 13.6 years
- Adult weight
- 26 g
- Female sexual maturity
- 365 days
- Male sexual maturity
- 365 days
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00888)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,813 bp
Protein-coding11,378 bp
12S rRNA974 bp
16S rRNA1,598 bp
All tRNA1,540 bp
D-loop1,237 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 44.48% | −0.402 | +0.031 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 43.46% | −0.549 | +0.071 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.36% | −0.293 | +0.048 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 45.76% | −0.367 | +0.121 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 43.45% | −0.671 | +0.095 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.03% | −0.565 | +0.106 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 47.07% | −0.371 | +0.070 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 46.72% | −0.427 | +0.016 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 45.79% | −0.485 | +0.043 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 46.15% | −0.519 | +0.119 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 45.77% | −0.498 | +0.140 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 47.78% | −0.589 | +0.491 | |||||
| CYTBCytochrome b | 1,143 bp | 46.63% | −0.433 | +0.089 | |||||
| 12S rRNA12S ribosomal RNA | 974 bp | 48.26% | −0.119 | +0.183 | |||||
| 16S rRNA16S ribosomal RNA | 1,598 bp | 43.30% | −0.084 | +0.210 | |||||
| D-loopControl region (D-loop) | 1,237 bp | 41.47% | −0.318 | −0.006 |
Codon usage
Counts per codon, darker is more frequent3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.7%
UUU44
UUC171
Leu L17.5%
UUA55
UUG12
CUU57
CUC152
CUA357
CUG33
Ile I8.0%
AUU103
AUC199
Met M4.3%
AUA130
AUG33
Val V5.3%
GUU37
GUC58
GUA87
GUG20
Ser S7.7%
UCU42
UCC87
UCA97
UCG9
AGU8
AGC50
Pro P5.8%
CCU41
CCC84
CCA93
CCG4
Thr T8.1%
ACU68
ACC118
ACA113
ACG10
Ala A8.0%
GCU55
GCC136
GCA100
GCG13
Tyr Y2.9%
UAU27
UAC84
His H2.7%
CAU18
CAC84
Gln Q2.5%
CAA90
CAG4
Asn N3.5%
AAU21
AAC112
Lys K2.2%
AAA79
AAG5
Asp D1.7%
GAU14
GAC51
Glu E2.5%
GAA84
GAG10
Cys C0.7%
UGU5
UGC23
Trp W2.8%
UGA100
UGG6
Arg R1.9%
CGU10
CGC11
CGA45
CGG5
Gly G5.9%
GGU29
GGC68
GGA97
GGG29
Stop 0.3%
UAA6
UAG1
AGA2
AGG1
Genome map
38 annotated features in NC_082148.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,042 | 974 bp | + | 48.3% |
| tRNA-Val | Transfer RNA | 1,043 | 1,112 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,113 | 2,710 | 1,598 bp | + | 43.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,711 | 2,785 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,800 | 3,777 | 978 bp | + | 44.5% |
| tRNA-Ile | Transfer RNA | 3,783 | 3,854 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,860 | 3,930 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,930 | 3,998 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,999 | 5,038 | 1,040 bp | + | 43.5% |
| tRNA-Trp | Transfer RNA | 5,039 | 5,109 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,111 | 5,179 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,188 | 5,260 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,261 | 5,327 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,327 | 5,397 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,399 | 6,949 | 1,551 bp | + | 46.4% |
| tRNA-Ser (UCN) | Transfer RNA | 6,941 | 7,013 | 73 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,019 | 7,087 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,097 | 7,780 | 684 bp | + | 45.8% |
| tRNA-Lys | Transfer RNA | 7,782 | 7,850 | 69 bp | + | – |
| ATP8 | Protein-coding gene | 7,852 | 8,019 | 168 bp | + | 43.5% |
| ATP6 | Protein-coding gene | 8,010 | 8,693 | 684 bp | + | 45.0% |
| COX3 | Protein-coding gene | 8,701 | 9,484 | 784 bp | + | 47.1% |
| tRNA-Gly | Transfer RNA | 9,485 | 9,553 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,554 | 9,904 | 351 bp | + | 46.7% |
| tRNA-Arg | Transfer RNA | 9,906 | 9,975 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,977 | 10,273 | 297 bp | + | 45.8% |
| ND4 | Protein-coding gene | 10,267 | 11,644 | 1,378 bp | + | 46.2% |
| tRNA-His | Transfer RNA | 11,645 | 11,714 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,715 | 11,780 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,780 | 11,850 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,851 | 13,668 | 1,818 bp | + | 45.8% |
| CYTB | Protein-coding gene | 13,677 | 14,819 | 1,143 bp | + | 46.6% |
| tRNA-Thr | Transfer RNA | 14,823 | 14,891 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,907 | 14,976 | 70 bp | − | – |
| ND6 | Protein-coding gene | 14,986 | 15,504 | 519 bp | − | 47.8% |
| tRNA-Glu | Transfer RNA | 15,506 | 15,576 | 71 bp | − | – |
| D-loop | Control region | 15,577 | 16,813 | 1,237 bp | – | 41.5% |