Chlorodrepanis flava

Oahu Amakihi

Maximum lifespan

4.9 yr

USGS longevity records

mtDNA size

16,835 bp

RefSeq NC_025608.1

GC content

45.53%

Whole genome

Non-coding

1,348 bp

D-loop 1,252 bp

Where Oahu Amakihi sits among 2,335 species

Whole-genome GC content against maximum lifespan. Oahu Amakihi has the 2,057th longest lifespan of them.

This species
Other birds
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,835 bp

GC skew (G − C) / (G + C): −0.378
AT skew (A − T) / (A + T): +0.122

Life history

Maximum lifespan: 4.9 years

Lifespan from USGS Bird Banding Laboratory · USGS longevity records

About this record

Lifespan source: NABBP Longevity Records v2025.1
Based on: an animal in the wild
Data quality: acceptable
Licence: U.S. Government work
Status: New in build 2
In the database since: build 2 (2026-11-13)

Provisional: the EURING list could not be retrieved, so the USGS record is used.

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,835 bp

Protein-coding11,379 bp

12S rRNA976 bp

16S rRNA1,598 bp

All tRNA1,543 bp

D-loop1,252 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Chlorodrepanis flava genes

ND1NADH dehydrogenase subunit 1	978 bp	26.7%	27.4%	14.4%	31.5%	45.91%	−0.372	−0.013
ND2NADH dehydrogenase subunit 2	1,040 bp	30.1%	25.5%	10.4%	34.0%	44.42%	−0.532	+0.083
COX1Cytochrome c oxidase subunit I	1,551 bp	27.7%	24.6%	16.4%	31.2%	47.65%	−0.310	+0.059
COX2Cytochrome c oxidase subunit II	685 bp	31.1%	24.1%	14.9%	29.8%	44.74%	−0.333	+0.127
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	28.0%	7.7%	35.7%	43.45%	−0.644	+0.011
ATP6ATP synthase F0 subunit 6	684 bp	30.6%	24.4%	10.4%	34.6%	45.03%	−0.539	+0.112
COX3Cytochrome c oxidase subunit III	784 bp	27.6%	24.9%	15.3%	32.3%	47.58%	−0.357	+0.051
ND3NADH dehydrogenase subunit 3	351 bp	28.5%	25.9%	12.8%	32.8%	45.58%	−0.438	+0.047
ND4LNADH dehydrogenase subunit 4L	297 bp	27.3%	25.6%	11.4%	35.7%	47.14%	−0.514	+0.032
ND4NADH dehydrogenase subunit 4	1,378 bp	30.6%	22.8%	11.0%	35.6%	46.59%	−0.526	+0.147
ND5NADH dehydrogenase subunit 5	1,818 bp	31.4%	22.8%	10.8%	35.0%	45.77%	−0.529	+0.158
ND6NADH dehydrogenase subunit 6	519 bp	38.7%	10.2%	9.8%	41.2%	51.06%	−0.615	+0.583
CYTBCytochrome b	1,143 bp	28.2%	24.4%	13.5%	33.9%	47.42%	−0.432	+0.072
12S rRNA12S ribosomal RNA	976 bp	30.7%	20.4%	21.2%	27.5%	48.77%	−0.128	+0.202
16S rRNA16S ribosomal RNA	1,598 bp	34.4%	22.0%	19.7%	23.8%	43.55%	−0.095	+0.220
D-loopControl region (D-loop)	1,252 bp	29.9%	28.0%	12.8%	29.4%	42.17%	−0.394	+0.033

Codon usage

Counts per codon, darker is more frequent

Gene

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%

UUU38

UUC182

Leu L17.6%

UUA52

UUG19

CUU63

CUC157

CUA334

CUG44

Ile I7.7%

AUU90

AUC203

Met M4.2%

AUA127

AUG34

Val V5.2%

GUU32

GUC59

GUA78

GUG28

Ser S7.8%

UCU41

UCC97

UCA90

UCG9

AGU8

AGC52

Pro P5.8%

CCU40

CCC84

CCA92

CCG6

Thr T8.1%

ACU60

ACC128

ACA116

ACG5

Ala A8.0%

GCU54

GCC136

GCA107

GCG8

Tyr Y2.9%

UAU22

UAC88

His H2.7%

CAU20

CAC81

Gln Q2.5%

CAA89

CAG6

Asn N3.6%

AAU24

AAC113

Lys K2.3%

AAA82

AAG4

Asp D1.7%

GAU9

GAC57

Glu E2.4%

GAA79

GAG11

Cys C0.7%

UGU9

UGC19

Trp W2.8%

UGA99

UGG8

Arg R1.9%

CGU7

CGC14

CGA43

CGG7

Gly G5.9%

GGU24

GGC56

GGA103

GGG40

Stop 0.2%

UAA4

UAG2

AGA2

AGG1

Genome map

38 annotated features in NC_025608.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Chlorodrepanis flava (NC_025608.1)
Feature	Type	Start	End	Length	Strand	GC
D-loop	Control region	1	1,252	1,252 bp	–	42.2%
tRNA-Phe	Transfer RNA	1,253	1,320	68 bp	+	–
12S rRNA	Ribosomal RNA	1,321	2,296	976 bp	+	48.8%
tRNA-Val	Transfer RNA	2,297	2,366	70 bp	+	–
16S rRNA	Ribosomal RNA	2,367	3,964	1,598 bp	+	43.6%
tRNA-Leu (UUR)	Transfer RNA	3,965	4,039	75 bp	+	–
ND1	Protein-coding gene	4,054	5,031	978 bp	+	45.9%
tRNA-Ile	Transfer RNA	5,037	5,110	74 bp	+	–
tRNA-Gln	Transfer RNA	5,114	5,184	71 bp	−	–
tRNA-Met	Transfer RNA	5,184	5,252	69 bp	+	–
ND2	Protein-coding gene	5,253	6,292	1,040 bp	+	44.4%
tRNA-Trp	Transfer RNA	6,293	6,363	71 bp	+	–
tRNA-Ala	Transfer RNA	6,365	6,433	69 bp	−	–
tRNA-Asn	Transfer RNA	6,442	6,514	73 bp	−	–
tRNA-Cys	Transfer RNA	6,515	6,581	67 bp	−	–
tRNA-Tyr	Transfer RNA	6,581	6,651	71 bp	−	–
COX1	Protein-coding gene	6,653	8,203	1,551 bp	+	47.7%
tRNA-Ser (UCN)	Transfer RNA	8,195	8,267	73 bp	−	–
tRNA-Asp	Transfer RNA	8,271	8,339	69 bp	+	–
COX2	Protein-coding gene	8,350	9,034	685 bp	+	44.7%
tRNA-Lys	Transfer RNA	9,035	9,103	69 bp	+	–
ATP8	Protein-coding gene	9,105	9,272	168 bp	+	43.5%
ATP6	Protein-coding gene	9,263	9,946	684 bp	+	45.0%
COX3	Protein-coding gene	9,955	10,738	784 bp	+	47.6%
tRNA-Gly	Transfer RNA	10,739	10,807	69 bp	+	–
ND3	Protein-coding gene	10,808	11,158	351 bp	+	45.6%
tRNA-Arg	Transfer RNA	11,160	11,229	70 bp	+	–
ND4L	Protein-coding gene	11,231	11,527	297 bp	+	47.1%
ND4	Protein-coding gene	11,521	12,898	1,378 bp	+	46.6%
tRNA-His	Transfer RNA	12,899	12,968	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	12,969	13,034	66 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	13,034	13,104	71 bp	+	–
ND5	Protein-coding gene	13,105	14,922	1,818 bp	+	45.8%
CYTB	Protein-coding gene	14,929	16,071	1,143 bp	+	47.4%
tRNA-Thr	Transfer RNA	16,075	16,143	69 bp	+	–
tRNA-Pro	Transfer RNA	16,165	16,234	70 bp	−	–
ND6	Protein-coding gene	16,244	16,762	519 bp	−	51.1%
tRNA-Glu	Transfer RNA	16,764	16,835	72 bp	−	–