Colistium nudipinnis
New Zealand turbot
GC content
45.67%
Whole genome
Non-coding
984 bp
D-loop 919 bp
Where New Zealand turbot sits among 2,335 species
Whole-genome GC content against maximum lifespan. New Zealand turbot has the 1,173rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,588 bp
- GC skew (G − C) / (G + C)
- −0.230
- AT skew (A − T) / (A + T)
- −0.020
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,588 bp
Protein-coding11,413 bp
12S rRNA942 bp
16S rRNA1,711 bp
All tRNA1,538 bp
D-loop919 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 44.82% | −0.268 | −0.145 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,049 bp | 47.66% | −0.392 | −0.137 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.29% | −0.148 | −0.121 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.60% | −0.211 | −0.014 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.83% | −0.221 | −0.011 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.32% | −0.368 | −0.144 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.05% | −0.242 | −0.080 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.41% | −0.329 | −0.258 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.82% | −0.255 | −0.158 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.20% | −0.273 | −0.087 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 45.24% | −0.298 | −0.063 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.19% | −0.321 | +0.400 | |||||
| CYTBCytochrome b | 1,144 bp | 46.24% | −0.316 | −0.148 | |||||
| 12S rRNA12S ribosomal RNA | 942 bp | 46.60% | −0.062 | +0.157 | |||||
| 16S rRNA16S ribosomal RNA | 1,711 bp | 44.54% | −0.110 | +0.163 | |||||
| D-loopControl region (D-loop) | 919 bp | 35.58% | −0.235 | +0.044 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU133
UUC107
Leu L17.2%
UUA85
UUG29
CUU198
CUC127
CUA141
CUG75
Ile I7.2%
AUU156
AUC117
Met M4.2%
AUA73
AUG86
Val V6.1%
GUU70
GUC62
GUA79
GUG20
Ser S6.3%
UCU63
UCC58
UCA51
UCG14
AGU11
AGC43
Pro P5.8%
CCU83
CCC88
CCA40
CCG9
Thr T7.5%
ACU72
ACC86
ACA112
ACG15
Ala A9.2%
GCU99
GCC130
GCA94
GCG28
Tyr Y3.0%
UAU31
UAC85
His H2.7%
CAU32
CAC72
Gln Q2.4%
CAA63
CAG28
Asn N3.1%
AAU45
AAC73
Lys K1.9%
AAA49
AAG24
Asp D2.1%
GAU23
GAC56
Glu E2.7%
GAA64
GAG40
Cys C0.7%
UGU10
UGC17
Trp W3.0%
UGA92
UGG22
Arg R2.1%
CGU7
CGC22
CGA30
CGG21
Gly G6.4%
GGU33
GGC86
GGA57
GGG66
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_023447.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,010 | 942 bp | + | 46.6% |
| tRNA-Val | Transfer RNA | 1,011 | 1,081 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,082 | 2,792 | 1,711 bp | + | 44.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,794 | 2,867 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,868 | 3,842 | 975 bp | + | 44.8% |
| tRNA-Ile | Transfer RNA | 3,848 | 3,917 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,917 | 3,987 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,987 | 4,055 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,057 | 5,105 | 1,049 bp | + | 47.7% |
| tRNA-Trp | Transfer RNA | 5,106 | 5,176 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,178 | 5,246 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,248 | 5,320 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,361 | 5,427 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,420 | 5,489 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,491 | 7,041 | 1,551 bp | + | 46.3% |
| tRNA-Ser (UCN) | Transfer RNA | 7,042 | 7,112 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,116 | 7,184 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,191 | 7,881 | 691 bp | + | 46.6% |
| tRNA-Lys | Transfer RNA | 7,882 | 7,955 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,957 | 8,124 | 168 bp | + | 45.8% |
| ATP6 | Protein-coding gene | 8,115 | 8,798 | 684 bp | + | 45.3% |
| COX3 | Protein-coding gene | 8,798 | 9,582 | 785 bp | + | 49.1% |
| tRNA-Gly | Transfer RNA | 9,583 | 9,654 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,655 | 10,003 | 349 bp | + | 44.4% |
| tRNA-Arg | Transfer RNA | 10,004 | 10,072 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,073 | 10,369 | 297 bp | + | 48.8% |
| ND4 | Protein-coding gene | 10,363 | 11,743 | 1,381 bp | + | 46.2% |
| tRNA-His | Transfer RNA | 11,744 | 11,812 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,813 | 11,879 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,884 | 11,956 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,957 | 13,795 | 1,839 bp | + | 45.2% |
| ND6 | Protein-coding gene | 13,792 | 14,313 | 522 bp | − | 50.2% |
| tRNA-Glu | Transfer RNA | 14,314 | 14,382 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,384 | 15,527 | 1,144 bp | + | 46.2% |
| tRNA-Thr | Transfer RNA | 15,528 | 15,599 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,599 | 15,669 | 71 bp | − | – |
| D-loop | Control region | 15,670 | 16,588 | 919 bp | – | 35.6% |