MitoAge

Curruca curruca

Lesser whitethroat

Add to compare Download FASTA
Maximum lifespan
9 yr
AnAge record
mtDNA size
17,959 bp
RefSeq NC_046417.1
GC content
47.20%
Whole genome
Non-coding
2,474 bp
D-loop 2,385 bp

Where Lesser whitethroat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Lesser whitethroat has the 1,664th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Lesser whitethroat
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,959 bp
GC skew (G − C) / (G + C)
−0.372
AT skew (A − T) / (A + T)
+0.109

Life history

Maximum lifespan
9 years
Adult weight
11.4 g
Basal metabolic rate
0.199 W
Female sexual maturity
365 days
Male sexual maturity
365 days

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01269)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,959 bp
Protein-coding11,377 bp
12S rRNA976 bp
16S rRNA1,597 bp
All tRNA1,544 bp
D-loop2,385 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.1%24.7%13.4%34.8%48.16%−0.444+0.045
ND2NADH dehydrogenase subunit 21,040 bp29.8%22.2%11.3%36.6%47.98%−0.527+0.146
COX1Cytochrome c oxidase subunit I1,551 bp27.9%24.3%16.6%31.3%47.84%−0.307+0.068
COX2Cytochrome c oxidase subunit II684 bp29.2%21.3%15.2%34.2%49.42%−0.385+0.156
ATP8ATP synthase F0 subunit 8168 bp30.4%26.2%7.1%36.3%43.45%−0.671+0.074
ATP6ATP synthase F0 subunit 6684 bp30.4%22.8%9.9%36.8%46.78%−0.575+0.143
COX3Cytochrome c oxidase subunit III784 bp25.9%24.6%15.9%33.5%49.49%−0.356+0.025
ND3NADH dehydrogenase subunit 3350 bp24.6%26.9%16.0%32.6%48.57%−0.341−0.044
ND4LNADH dehydrogenase subunit 4L297 bp27.6%22.6%13.1%36.7%49.83%−0.473+0.101
ND4NADH dehydrogenase subunit 41,378 bp30.3%22.9%10.8%36.1%46.88%−0.539+0.139
ND5NADH dehydrogenase subunit 51,818 bp31.1%22.5%12.2%34.2%46.37%−0.476+0.161
ND6NADH dehydrogenase subunit 6519 bp40.1%11.9%9.4%38.5%47.98%−0.606+0.541
CYTBCytochrome b1,143 bp25.9%24.8%13.8%35.4%49.26%−0.439+0.021
12S rRNA12S ribosomal RNA976 bp30.1%20.4%21.8%27.7%49.49%−0.118+0.193
16S rRNA16S ribosomal RNA1,597 bp33.8%21.5%20.6%24.1%44.71%−0.078+0.223
D-loopControl region (D-loop)2,385 bp24.6%27.6%15.4%32.5%47.84%−0.357−0.058

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU42
UUC178
Leu L17.8%
UUA38
UUG16
CUU61
CUC174
CUA324
CUG61
Ile I7.5%
AUU68
AUC215
Met M4.2%
AUA112
AUG47
Val V5.0%
GUU32
GUC49
GUA76
GUG32
Ser S7.1%
UCU34
UCC103
UCA76
UCG7
AGU4
AGC45
Pro P6.0%
CCU42
CCC72
CCA108
CCG5
Thr T8.7%
ACU58
ACC136
ACA131
ACG4
Ala A8.3%
GCU47
GCC144
GCA115
GCG10
Tyr Y3.0%
UAU20
UAC94
His H2.7%
CAU19
CAC85
Gln Q2.4%
CAA82
CAG11
Asn N3.6%
AAU16
AAC119
Lys K2.3%
AAA81
AAG6
Asp D1.8%
GAU13
GAC54
Glu E2.3%
GAA68
GAG20
Cys C0.7%
UGU3
UGC25
Trp W2.8%
UGA98
UGG9
Arg R1.9%
CGU7
CGC24
CGA32
CGG9
Gly G6.0%
GGU22
GGC87
GGA90
GGG27
Stop 0.2%
UAA5
UAG1
AGA1
AGG2

Genome map

39 annotated features in NC_046417.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (47.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,046976 bp+49.5%
tRNA-ValTransfer RNA1,0471,11670 bp+–
16S rRNARibosomal RNA1,1172,7131,597 bp+44.7%
tRNA-Leu (UUR)Transfer RNA2,7142,78875 bp+–
ND1Protein-coding gene2,8113,788978 bp+48.2%
tRNA-IleTransfer RNA3,7953,86874 bp+–
tRNA-GlnTransfer RNA3,8753,94571 bp−–
tRNA-MetTransfer RNA3,9454,01369 bp+–
ND2Protein-coding gene4,0145,0531,040 bp+48.0%
tRNA-TrpTransfer RNA5,0545,12370 bp+–
tRNA-AlaTransfer RNA5,1255,19369 bp−–
tRNA-AsnTransfer RNA5,2035,27573 bp−–
tRNA-CysTransfer RNA5,2765,34065 bp−–
tRNA-TyrTransfer RNA5,3405,41071 bp−–
COX1Protein-coding gene5,4126,9621,551 bp+47.8%
tRNA-Ser (UCN)Transfer RNA6,9547,02572 bp−–
tRNA-AspTransfer RNA7,0317,09969 bp+–
COX2Protein-coding gene7,1077,790684 bp+49.4%
tRNA-LysTransfer RNA7,7927,86170 bp+–
ATP8Protein-coding gene7,8638,030168 bp+43.5%
ATP6Protein-coding gene8,0218,704684 bp+46.8%
COX3Protein-coding gene8,7149,497784 bp+49.5%
tRNA-GlyTransfer RNA9,4989,56669 bp+–
ND3Protein-coding gene9,5679,916350 bp+48.6%
tRNA-ArgTransfer RNA9,9179,98670 bp+–
ND4LProtein-coding gene9,98810,284297 bp+49.8%
ND4Protein-coding gene10,27811,6551,378 bp+46.9%
tRNA-HisTransfer RNA11,65611,72570 bp+–
tRNA-Ser (AGY)Transfer RNA11,72611,79166 bp+–
tRNA-Leu (CUN)Transfer RNA11,79211,86271 bp+–
ND5Protein-coding gene11,86313,6801,818 bp+46.4%
CYTBProtein-coding gene13,68914,8311,143 bp+49.3%
tRNA-ThrTransfer RNA14,83514,90470 bp+–
D-loopControl region14,90516,0101,106 bp–47.8%
tRNA-ProTransfer RNA16,01116,08070 bp−–
ND6Protein-coding gene16,09016,608519 bp−48.0%
tRNA-GluTransfer RNA16,60916,68072 bp−–
D-loopControl region16,68117,9591,279 bp–47.8%

Downloads