Cynoglossus joyneri
Red tonguesole
GC content
39.59%
Whole genome
Non-coding
858 bp
Including the D-loop
Where Red tonguesole sits among 2,335 species
Whole-genome GC content against maximum lifespan. Red tonguesole has the 2,046th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,428 bp
- GC skew (G − C) / (G + C)
- −0.239
- AT skew (A − T) / (A + T)
- +0.022
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,428 bp
Protein-coding11,406 bp
12S rRNA939 bp
16S rRNA1,676 bp
All tRNA1,550 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 972 bp | 39.40% | −0.243 | −0.036 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,041 bp | 37.46% | −0.415 | +0.038 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 41.01% | −0.176 | −0.051 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 38.50% | −0.263 | +0.002 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 40.61% | −0.433 | −0.020 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 38.86% | −0.321 | −0.046 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 44.71% | −0.248 | −0.074 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 41.26% | −0.403 | −0.073 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 44.11% | −0.374 | −0.060 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,372 bp | 38.27% | −0.318 | −0.039 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,854 bp | 38.73% | −0.309 | −0.037 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 37.36% | −0.323 | +0.333 | |||||
| CYTBCytochrome b | 1,141 bp | 40.58% | −0.322 | −0.097 | |||||
| 12S rRNA12S ribosomal RNA | 939 bp | 44.30% | −0.053 | +0.113 | |||||
| 16S rRNA16S ribosomal RNA | 1,676 bp | 39.26% | −0.082 | +0.206 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU111
UUC120
Leu L16.7%
UUA170
UUG12
CUU149
CUC92
CUA182
CUG30
Ile I7.9%
AUU199
AUC103
Met M5.3%
AUA163
AUG37
Val V5.8%
GUU71
GUC38
GUA91
GUG20
Ser S6.8%
UCU57
UCC44
UCA99
UCG6
AGU19
AGC35
Pro P5.3%
CCU78
CCC39
CCA77
CCG9
Thr T7.6%
ACU82
ACC80
ACA124
ACG3
Ala A8.4%
GCU84
GCC100
GCA119
GCG15
Tyr Y3.4%
UAU76
UAC52
His H2.5%
CAU36
CAC61
Gln Q2.4%
CAA79
CAG13
Asn N3.2%
AAU59
AAC62
Lys K2.1%
AAA72
AAG8
Asp D2.0%
GAU35
GAC41
Glu E2.5%
GAA81
GAG13
Cys C0.9%
UGU18
UGC17
Trp W2.9%
UGA105
UGG4
Arg R2.0%
CGU15
CGC5
CGA50
CGG5
Gly G6.1%
GGU48
GGC50
GGA95
GGG38
Stop 0.2%
UAA7
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_030256.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (39.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,008 | 939 bp | + | 44.3% |
| tRNA-Val | Transfer RNA | 1,009 | 1,081 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,082 | 2,757 | 1,676 bp | + | 39.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,757 | 2,831 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,832 | 3,803 | 972 bp | + | 39.4% |
| tRNA-Gln | Transfer RNA | 4,550 | 4,621 | 72 bp | + | – |
| tRNA-Ile | Transfer RNA | 4,625 | 4,693 | 69 bp | + | – |
| tRNA-Met | Transfer RNA | 4,707 | 4,773 | 67 bp | + | – |
| ND2 | Protein-coding gene | 4,775 | 5,815 | 1,041 bp | + | 37.5% |
| tRNA-Trp | Transfer RNA | 5,820 | 5,888 | 69 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,891 | 5,959 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,963 | 6,035 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 6,077 | 6,150 | 74 bp | − | – |
| tRNA-Tyr | Transfer RNA | 6,151 | 6,220 | 70 bp | − | – |
| COX1 | Protein-coding gene | 6,222 | 7,772 | 1,551 bp | + | 41.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,773 | 7,843 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,846 | 7,914 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,917 | 8,607 | 691 bp | + | 38.5% |
| tRNA-Lys | Transfer RNA | 8,608 | 8,682 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 8,685 | 8,849 | 165 bp | + | 40.6% |
| ATP6 | Protein-coding gene | 8,840 | 9,523 | 684 bp | + | 38.9% |
| COX3 | Protein-coding gene | 9,523 | 10,307 | 785 bp | + | 44.7% |
| tRNA-Gly | Transfer RNA | 10,308 | 10,378 | 71 bp | + | – |
| ND3 | Protein-coding gene | 10,379 | 10,727 | 349 bp | + | 41.3% |
| tRNA-Arg | Transfer RNA | 10,728 | 10,796 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,797 | 11,093 | 297 bp | + | 44.1% |
| ND4 | Protein-coding gene | 11,087 | 12,458 | 1,372 bp | + | 38.3% |
| tRNA-His | Transfer RNA | 12,459 | 12,527 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 12,529 | 12,594 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 12,597 | 12,668 | 72 bp | + | – |
| ND5 | Protein-coding gene | 12,672 | 14,525 | 1,854 bp | + | 38.7% |
| ND6 | Protein-coding gene | 14,531 | 15,052 | 522 bp | − | 37.4% |
| tRNA-Glu | Transfer RNA | 15,053 | 15,121 | 69 bp | − | – |
| CYTB | Protein-coding gene | 15,124 | 16,264 | 1,141 bp | + | 40.6% |
| tRNA-Thr | Transfer RNA | 16,265 | 16,334 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 16,334 | 16,403 | 70 bp | − | – |