Drymodes brunneopygia

Southern scrub robin

Maximum lifespan

9.7 yr

AnAge record

mtDNA size

16,851 bp

RefSeq NC_053105.1

GC content

45.45%

Whole genome

Non-coding

1,347 bp

D-loop 1,253 bp

Where Southern scrub robin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Southern scrub robin has the 1,624th longest lifespan of them.

This species
Other birds
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,851 bp

GC skew (G − C) / (G + C): −0.348
AT skew (A − T) / (A + T): +0.126

Life history

Maximum lifespan: 9.7 years
Adult weight: 34 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01204)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, small sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,851 bp

Protein-coding11,380 bp

12S rRNA984 bp

16S rRNA1,606 bp

All tRNA1,546 bp

D-loop1,253 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Drymodes brunneopygia genes

ND1NADH dehydrogenase subunit 1	978 bp	27.4%	26.9%	14.9%	30.8%	45.71%	−0.347	+0.009
ND2NADH dehydrogenase subunit 2	1,040 bp	31.2%	23.9%	11.5%	33.4%	44.90%	−0.486	+0.131
COX1Cytochrome c oxidase subunit I	1,551 bp	28.6%	24.2%	17.2%	30.0%	47.26%	−0.271	+0.083
COX2Cytochrome c oxidase subunit II	684 bp	29.2%	24.0%	15.9%	30.8%	46.78%	−0.319	+0.099
ATP8ATP synthase F0 subunit 8	168 bp	32.7%	25.6%	4.8%	36.9%	41.67%	−0.771	+0.122
ATP6ATP synthase F0 subunit 6	684 bp	30.4%	24.7%	11.4%	33.5%	44.88%	−0.492	+0.103
COX3Cytochrome c oxidase subunit III	785 bp	26.1%	25.5%	15.7%	32.7%	48.41%	−0.353	+0.012
ND3NADH dehydrogenase subunit 3	351 bp	27.1%	28.2%	12.8%	31.9%	44.73%	−0.427	−0.021
ND4LNADH dehydrogenase subunit 4L	297 bp	27.6%	25.3%	13.5%	33.7%	47.14%	−0.429	+0.045
ND4NADH dehydrogenase subunit 4	1,379 bp	29.9%	23.1%	12.1%	35.0%	47.06%	−0.485	+0.129
ND5NADH dehydrogenase subunit 5	1,818 bp	31.8%	23.2%	12.8%	32.3%	45.05%	−0.433	+0.157
ND6NADH dehydrogenase subunit 6	519 bp	43.0%	12.1%	10.0%	34.9%	44.89%	−0.554	+0.559
CYTBCytochrome b	1,143 bp	28.9%	25.6%	13.2%	32.3%	45.49%	−0.419	+0.059
12S rRNA12S ribosomal RNA	984 bp	31.3%	19.7%	20.8%	28.2%	48.98%	−0.149	+0.227
16S rRNA16S ribosomal RNA	1,606 bp	34.3%	21.2%	19.9%	24.5%	44.46%	−0.104	+0.235
D-loopControl region (D-loop)	1,253 bp	28.7%	27.5%	13.2%	30.7%	43.90%	−0.400	+0.021

Codon usage

Counts per codon, darker is more frequent

Gene

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%

UUU67

UUC158

Leu L16.8%

UUA76

UUG30

CUU60

CUC112

CUA292

CUG67

Ile I7.3%

AUU83

AUC195

Met M4.6%

AUA135

AUG41

Val V5.2%

GUU38

GUC56

GUA80

GUG24

Ser S7.6%

UCU31

UCC92

UCA97

UCG11

AGU8

AGC50

Pro P6.0%

CCU31

CCC66

CCA123

CCG7

Thr T8.6%

ACU47

ACC137

ACA136

ACG7

Ala A8.1%

GCU54

GCC156

GCA88

GCG10

Tyr Y3.0%

UAU28

UAC86

His H2.8%

CAU27

CAC80

Gln Q2.6%

CAA86

CAG12

Asn N3.6%

AAU28

AAC107

Lys K2.2%

AAA70

AAG12

Asp D1.9%

GAU20

GAC51

Glu E2.4%

GAA75

GAG15

Cys C0.8%

UGU5

UGC25

Trp W2.8%

UGA90

UGG15

Arg R1.9%

CGU7

CGC16

CGA43

CGG7

Gly G5.7%

GGU23

GGC59

GGA99

GGG36

Stop 0.3%

UAA6

UAG1

AGA1

AGG2

Genome map

38 annotated features in NC_053105.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Drymodes brunneopygia (NC_053105.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	69	1,052	984 bp	+	49.0%
tRNA-Val	Transfer RNA	1,052	1,121	70 bp	+	–
16S rRNA	Ribosomal RNA	1,122	2,727	1,606 bp	+	44.5%
tRNA-Leu (UUR)	Transfer RNA	2,729	2,803	75 bp	+	–
ND1	Protein-coding gene	2,825	3,802	978 bp	+	45.7%
tRNA-Ile	Transfer RNA	3,810	3,883	74 bp	+	–
tRNA-Gln	Transfer RNA	3,890	3,960	71 bp	−	–
tRNA-Met	Transfer RNA	3,960	4,028	69 bp	+	–
ND2	Protein-coding gene	4,029	5,068	1,040 bp	+	44.9%
tRNA-Trp	Transfer RNA	5,069	5,139	71 bp	+	–
tRNA-Ala	Transfer RNA	5,141	5,209	69 bp	−	–
tRNA-Asn	Transfer RNA	5,213	5,285	73 bp	−	–
tRNA-Cys	Transfer RNA	5,290	5,356	67 bp	−	–
tRNA-Tyr	Transfer RNA	5,357	5,426	70 bp	−	–
COX1	Protein-coding gene	5,428	6,978	1,551 bp	+	47.3%
tRNA-Ser (UCN)	Transfer RNA	6,970	7,043	74 bp	−	–
tRNA-Asp	Transfer RNA	7,049	7,117	69 bp	+	–
COX2	Protein-coding gene	7,128	7,811	684 bp	+	46.8%
tRNA-Lys	Transfer RNA	7,813	7,881	69 bp	+	–
ATP8	Protein-coding gene	7,883	8,050	168 bp	+	41.7%
ATP6	Protein-coding gene	8,041	8,724	684 bp	+	44.9%
COX3	Protein-coding gene	8,731	9,515	785 bp	+	48.4%
tRNA-Gly	Transfer RNA	9,515	9,583	69 bp	+	–
ND3	Protein-coding gene	9,584	9,934	351 bp	+	44.7%
tRNA-Arg	Transfer RNA	9,936	10,005	70 bp	+	–
ND4L	Protein-coding gene	10,007	10,303	297 bp	+	47.1%
ND4	Protein-coding gene	10,297	11,675	1,379 bp	+	47.1%
tRNA-His	Transfer RNA	11,676	11,745	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,746	11,811	66 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,812	11,882	71 bp	+	–
ND5	Protein-coding gene	11,883	13,700	1,818 bp	+	45.1%
CYTB	Protein-coding gene	13,705	14,847	1,143 bp	+	45.5%
tRNA-Thr	Transfer RNA	14,851	14,919	69 bp	+	–
tRNA-Pro	Transfer RNA	14,928	14,997	70 bp	−	–
ND6	Protein-coding gene	15,008	15,526	519 bp	−	44.9%
tRNA-Glu	Transfer RNA	15,527	15,598	72 bp	−	–
D-loop	Control region	15,599	16,851	1,253 bp	–	43.9%