MitoAge

Elaphodus cephalophus

Tufted deer

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Maximum lifespan
22.7 yr
AnAge record
mtDNA size
16,347 bp
RefSeq NC_008749.1
GC content
37.44%
Whole genome
Non-coding
969 bp
D-loop 913 bp

Where Tufted deer sits among 2,335 species

Whole-genome GC content against maximum lifespan. Tufted deer has the 754th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Tufted deer
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,347 bp
GC skew (G − C) / (G + C)
−0.276
AT skew (A − T) / (A + T)
+0.060

Life history

Maximum lifespan
22.7 years
Adult weight
33.5 kg
Female sexual maturity
639 days
Male sexual maturity
2 years
Gestation or incubation
180 days
Litter or clutch size
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02023)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,347 bp
Protein-coding11,346 bp
12S rRNA957 bp
16S rRNA1,566 bp
All tRNA1,516 bp
D-loop913 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp31.6%30.8%11.7%25.9%37.62%−0.378+0.012
ND2NADH dehydrogenase subunit 21,044 bp36.0%29.0%9.1%25.9%34.96%−0.479+0.108
COX1Cytochrome c oxidase subunit I1,545 bp29.0%32.5%16.2%22.3%38.51%−0.156−0.057
COX2Cytochrome c oxidase subunit II684 bp33.8%28.9%14.5%22.8%37.28%−0.224+0.077
ATP8ATP synthase F0 subunit 8201 bp40.3%34.3%6.0%19.4%25.37%−0.529+0.080
ATP6ATP synthase F0 subunit 6681 bp31.3%31.7%12.2%24.8%37.00%−0.341−0.007
COX3Cytochrome c oxidase subunit III785 bp26.4%32.2%15.2%26.2%41.40%−0.268−0.100
ND3NADH dehydrogenase subunit 3347 bp31.7%30.5%11.8%25.9%37.75%−0.374+0.019
ND4LNADH dehydrogenase subunit 4L297 bp31.0%33.0%13.1%22.9%36.03%−0.271−0.032
ND4NADH dehydrogenase subunit 41,378 bp31.5%31.0%11.4%26.1%37.52%−0.393+0.008
ND5NADH dehydrogenase subunit 51,821 bp33.4%30.9%10.9%24.8%35.75%−0.389+0.039
ND6NADH dehydrogenase subunit 6528 bp41.1%23.1%8.0%27.8%35.80%−0.556+0.280
CYTBCytochrome b1,143 bp30.6%29.7%13.6%26.2%39.72%−0.317+0.016
12S rRNA12S ribosomal RNA957 bp36.6%23.1%18.0%22.4%40.33%−0.109+0.226
16S rRNA16S ribosomal RNA1,566 bp37.4%25.5%17.4%19.7%37.10%−0.060+0.190
D-loopControl region (D-loop)913 bp29.9%31.0%14.9%24.2%39.10%−0.238−0.018

Codon usage

Counts per codon, darker is more frequent

3,802 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.6%
UUU146
UUC106
Leu L15.5%
UUA142
UUG22
CUU78
CUC85
CUA239
CUG23
Ile I8.9%
AUU242
AUC96
Met M6.7%
AUA205
AUG49
Val V5.0%
GUU47
GUC40
GUA84
GUG19
Ser S7.3%
UCU57
UCC52
UCA107
UCG6
AGU23
AGC34
Pro P5.0%
CCU42
CCC63
CCA82
CCG5
Thr T8.2%
ACU63
ACC72
ACA161
ACG14
Ala A6.3%
GCU46
GCC84
GCA105
GCG6
Tyr Y3.4%
UAU92
UAC38
His H2.4%
CAU39
CAC54
Gln Q2.4%
CAA80
CAG11
Asn N4.3%
AAU93
AAC71
Lys K2.6%
AAA89
AAG9
Asp D1.7%
GAU29
GAC36
Glu E2.6%
GAA76
GAG22
Cys C0.6%
UGU7
UGC16
Trp W2.7%
UGA94
UGG10
Arg R1.7%
CGU4
CGC17
CGA38
CGG5
Gly G5.7%
GGU46
GGC49
GGA93
GGG29
Stop 0.3%
UAA7
UAG3
AGA0
AGG0

Genome map

38 annotated features in NC_008749.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,026957 bp+40.3%
tRNA-ValTransfer RNA1,0271,09367 bp+–
16S rRNARibosomal RNA1,0942,6591,566 bp+37.1%
tRNA-Leu (UUR)Transfer RNA2,6602,73475 bp+–
ND1Protein-coding gene2,7373,693957 bp+37.6%
tRNA-IleTransfer RNA3,6933,76169 bp+–
tRNA-GlnTransfer RNA3,7593,83072 bp−–
tRNA-MetTransfer RNA3,8333,90169 bp+–
ND2Protein-coding gene3,9024,9451,044 bp+35.0%
tRNA-TrpTransfer RNA4,9445,01168 bp+–
tRNA-AlaTransfer RNA5,0135,08270 bp−–
tRNA-AsnTransfer RNA5,0835,15573 bp−–
tRNA-CysTransfer RNA5,1885,25467 bp−–
tRNA-TyrTransfer RNA5,2555,32369 bp−–
COX1Protein-coding gene5,3256,8691,545 bp+38.5%
tRNA-Ser (AGY)Transfer RNA6,8676,93569 bp−–
tRNA-AspTransfer RNA6,9437,01068 bp+–
COX2Protein-coding gene7,0127,695684 bp+37.3%
tRNA-LysTransfer RNA7,6997,76668 bp+–
ATP8Protein-coding gene7,7687,968201 bp+25.4%
ATP6Protein-coding gene7,9298,609681 bp+37.0%
COX3Protein-coding gene8,6099,393785 bp+41.4%
tRNA-GlyTransfer RNA9,3939,46270 bp+–
ND3Protein-coding gene9,4639,809347 bp+37.8%
tRNA-ArgTransfer RNA9,8109,87869 bp+–
ND4LProtein-coding gene9,87910,175297 bp+36.0%
ND4Protein-coding gene10,16911,5461,378 bp+37.5%
tRNA-HisTransfer RNA11,54711,61670 bp+–
tRNA-Ser (UCN)Transfer RNA11,61711,67660 bp+–
tRNA-Leu (CUN)Transfer RNA11,67811,74770 bp+–
ND5Protein-coding gene11,74813,5681,821 bp+35.8%
ND6Protein-coding gene13,55214,079528 bp−35.8%
tRNA-GluTransfer RNA14,08014,14869 bp−–
CYTBProtein-coding gene14,15415,2961,143 bp+39.7%
tRNA-ThrTransfer RNA15,29715,36872 bp+–
tRNA-ProTransfer RNA15,36815,43467 bp−–
D-loopControl region15,43516,347913 bp–39.1%

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