Galeocerdo cuvier

Tiger shark

Maximum lifespan

50 yr

AnAge record

mtDNA size

16,703 bp

RefSeq NC_022193.1

GC content

36.87%

Whole genome

Non-coding

1,127 bp

D-loop 1,070 bp

Where Tiger shark sits among 2,335 species

Whole-genome GC content against maximum lifespan. Tiger shark has the 138th longest lifespan of them.

This species
Other sharks and rays
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,703 bp

GC skew (G − C) / (G + C): −0.294
AT skew (A − T) / (A + T): +0.007

Life history

Maximum lifespan: 50 years
Adult weight: 444.1 kg
Female sexual maturity: 7 years
Male sexual maturity: 5 years
Litter or clutch size: 31.5

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01764)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,703 bp

Protein-coding11,404 bp

12S rRNA952 bp

16S rRNA1,665 bp

All tRNA1,555 bp

D-loop1,070 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Galeocerdo cuvier genes

ND1NADH dehydrogenase subunit 1	975 bp	29.7%	31.5%	11.1%	27.7%	38.77%	−0.429	−0.028
ND2NADH dehydrogenase subunit 2	1,042 bp	31.4%	30.8%	9.1%	28.7%	37.81%	−0.518	+0.009
COX1Cytochrome c oxidase subunit I	1,557 bp	28.1%	35.1%	15.2%	21.6%	36.80%	−0.173	−0.110
COX2Cytochrome c oxidase subunit II	691 bp	32.0%	31.1%	14.5%	22.4%	36.90%	−0.216	+0.014
ATP8ATP synthase F0 subunit 8	168 bp	39.3%	34.5%	5.4%	20.8%	26.19%	−0.591	+0.065
ATP6ATP synthase F0 subunit 6	684 bp	32.5%	34.5%	9.4%	23.7%	33.04%	−0.434	−0.031
COX3Cytochrome c oxidase subunit III	786 bp	27.5%	32.1%	15.6%	24.8%	40.46%	−0.226	−0.077
ND3NADH dehydrogenase subunit 3	349 bp	26.1%	36.1%	14.3%	23.5%	37.82%	−0.242	−0.161
ND4LNADH dehydrogenase subunit 4L	297 bp	25.6%	37.0%	11.4%	25.9%	37.37%	−0.387	−0.183
ND4NADH dehydrogenase subunit 4	1,381 bp	30.6%	33.1%	10.6%	25.6%	36.28%	−0.413	−0.039
ND5NADH dehydrogenase subunit 5	1,830 bp	32.0%	33.2%	9.6%	25.2%	34.81%	−0.447	−0.019
ND6NADH dehydrogenase subunit 6	522 bp	42.5%	19.7%	8.0%	29.7%	37.74%	−0.574	+0.366
CYTBCytochrome b	1,145 bp	28.4%	33.8%	11.5%	26.3%	37.82%	−0.390	−0.087
12S rRNA12S ribosomal RNA	952 bp	34.5%	24.8%	18.4%	22.4%	40.76%	−0.098	+0.163
16S rRNA16S ribosomal RNA	1,665 bp	36.7%	26.7%	16.3%	20.2%	36.58%	−0.107	+0.157
D-loopControl region (D-loop)	1,070 bp	32.3%	35.4%	13.4%	18.9%	32.24%	−0.171	−0.046

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%

UUU144

UUC100

Leu L17.0%

UUA220

UUG10

CUU158

CUC96

CUA157

CUG6

Ile I9.4%

AUU223

AUC134

Met M4.5%

AUA148

AUG23

Val V4.4%

GUU61

GUC24

GUA73

GUG10

Ser S7.2%

UCU61

UCC50

UCA109

UCG1

AGU25

AGC29

Pro P5.4%

CCU61

CCC41

CCA102

CCG2

Thr T7.6%

ACU89

ACC81

ACA118

ACG1

Ala A7.0%

GCU102

GCC76

GCA88

GCG2

Tyr Y3.3%

UAU83

UAC43

His H2.7%

CAU55

CAC47

Gln Q2.5%

CAA91

CAG4

Asn N4.1%

AAU74

AAC83

Lys K2.2%

AAA83

AAG1

Asp D1.8%

GAU43

GAC24

Glu E2.6%

GAA82

GAG17

Cys C0.6%

UGU13

UGC11

Trp W3.2%

UGA118

UGG3

Arg R1.9%

CGU15

CGC13

CGA43

CGG1

Gly G6.0%

GGU73

GGC41

GGA93

GGG20

Stop 0.2%

UAA7

UAG0

AGA0

AGG1

Genome map

38 annotated features in NC_022193.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (36.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Galeocerdo cuvier (NC_022193.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	70	70 bp	+	–
12S rRNA	Ribosomal RNA	71	1,022	952 bp	+	40.8%
tRNA-Val	Transfer RNA	1,023	1,094	72 bp	+	–
16S rRNA	Ribosomal RNA	1,095	2,759	1,665 bp	+	36.6%
tRNA-Leu (UUR)	Transfer RNA	2,760	2,834	75 bp	+	–
ND1	Protein-coding gene	2,835	3,809	975 bp	+	38.8%
tRNA-Ile	Transfer RNA	3,811	3,880	70 bp	−	–
tRNA-Gln	Transfer RNA	3,882	3,953	72 bp	+	–
tRNA-Met	Transfer RNA	3,954	4,022	69 bp	+	–
ND2	Protein-coding gene	4,023	5,064	1,042 bp	+	37.8%
tRNA-Trp	Transfer RNA	5,065	5,137	73 bp	+	–
tRNA-Ala	Transfer RNA	5,139	5,207	69 bp	−	–
tRNA-Asn	Transfer RNA	5,208	5,280	73 bp	−	–
tRNA-Cys	Transfer RNA	5,316	5,383	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,385	5,454	70 bp	−	–
COX1	Protein-coding gene	5,456	7,012	1,557 bp	+	36.8%
tRNA-Ser (UCN)	Transfer RNA	7,013	7,083	71 bp	−	–
tRNA-Asp	Transfer RNA	7,087	7,156	70 bp	+	–
COX2	Protein-coding gene	7,164	7,854	691 bp	+	36.9%
tRNA-Lys	Transfer RNA	7,855	7,928	74 bp	+	–
ATP8	Protein-coding gene	7,930	8,097	168 bp	+	26.2%
ATP6	Protein-coding gene	8,088	8,771	684 bp	+	33.0%
COX3	Protein-coding gene	8,771	9,556	786 bp	+	40.5%
tRNA-Gly	Transfer RNA	9,559	9,628	70 bp	+	–
ND3	Protein-coding gene	9,629	9,977	349 bp	+	37.8%
tRNA-Arg	Transfer RNA	9,978	10,047	70 bp	+	–
ND4L	Protein-coding gene	10,048	10,344	297 bp	+	37.4%
ND4	Protein-coding gene	10,338	11,718	1,381 bp	+	36.3%
tRNA-His	Transfer RNA	11,719	11,787	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,788	11,854	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,855	11,926	72 bp	+	–
ND5	Protein-coding gene	11,927	13,756	1,830 bp	+	34.8%
ND6	Protein-coding gene	13,752	14,273	522 bp	−	37.7%
tRNA-Glu	Transfer RNA	14,274	14,343	70 bp	−	–
CYTB	Protein-coding gene	14,346	15,490	1,145 bp	+	37.8%
tRNA-Thr	Transfer RNA	15,491	15,562	72 bp	+	–
tRNA-Pro	Transfer RNA	15,565	15,633	69 bp	−	–
D-loop	Control region	15,634	16,703	1,070 bp	–	32.2%