Glyptocephalus stelleri
Blackfin flounder
GC content
46.28%
Whole genome
Non-coding
1,512 bp
D-loop 1,435 bp
Where Blackfin flounder sits among 2,335 species
Whole-genome GC content against maximum lifespan. Blackfin flounder has the 738th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,142 bp
- GC skew (G − C) / (G + C)
- −0.245
- AT skew (A − T) / (A + T)
- +0.012
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,142 bp
Protein-coding11,421 bp
12S rRNA951 bp
16S rRNA1,713 bp
All tRNA1,551 bp
D-loop1,435 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.97% | −0.271 | −0.133 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 49.57% | −0.432 | −0.028 | |||||
| COX1Cytochrome c oxidase subunit I | 1,566 bp | 46.68% | −0.193 | −0.085 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.57% | −0.208 | +0.024 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 39.29% | −0.576 | +0.176 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.37% | −0.327 | −0.133 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.03% | −0.252 | −0.103 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.71% | −0.341 | −0.207 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.50% | −0.361 | −0.147 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.69% | −0.293 | −0.067 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.11% | −0.283 | −0.015 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.36% | −0.413 | +0.436 | |||||
| CYTBCytochrome b | 1,141 bp | 47.50% | −0.306 | −0.135 | |||||
| 12S rRNA12S ribosomal RNA | 951 bp | 48.27% | −0.089 | +0.207 | |||||
| 16S rRNA16S ribosomal RNA | 1,713 bp | 46.64% | −0.104 | +0.212 | |||||
| D-loopControl region (D-loop) | 1,435 bp | 40.70% | −0.216 | +0.020 |
Codon usage
Counts per codon, darker is more frequent3,812 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU133
UUC108
Leu L17.1%
UUA91
UUG37
CUU143
CUC175
CUA147
CUG59
Ile I6.8%
AUU154
AUC104
Met M4.0%
AUA81
AUG73
Val V6.2%
GUU87
GUC53
GUA67
GUG28
Ser S6.5%
UCU55
UCC59
UCA57
UCG23
AGU11
AGC44
Pro P5.9%
CCU55
CCC99
CCA58
CCG12
Thr T7.7%
ACU49
ACC105
ACA119
ACG20
Ala A9.0%
GCU82
GCC125
GCA116
GCG21
Tyr Y2.9%
UAU42
UAC70
His H2.8%
CAU26
CAC80
Gln Q2.4%
CAA74
CAG19
Asn N3.0%
AAU27
AAC88
Lys K2.0%
AAA61
AAG17
Asp D2.0%
GAU12
GAC65
Glu E2.6%
GAA67
GAG32
Cys C0.6%
UGU8
UGC15
Trp W3.2%
UGA93
UGG29
Arg R2.0%
CGU8
CGC14
CGA41
CGG14
Gly G6.6%
GGU49
GGC95
GGA49
GGG60
Stop 0.2%
UAA5
UAG1
AGA1
AGG0
Genome map
38 annotated features in NC_060723.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,019 | 951 bp | + | 48.3% |
| tRNA-Val | Transfer RNA | 1,020 | 1,093 | 74 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,094 | 2,806 | 1,713 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,809 | 2,882 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,883 | 3,857 | 975 bp | + | 47.0% |
| tRNA-Ile | Transfer RNA | 3,863 | 3,933 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,933 | 4,003 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,004 | 4,072 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,072 | 5,116 | 1,045 bp | + | 49.6% |
| tRNA-Trp | Transfer RNA | 5,117 | 5,189 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,191 | 5,259 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,261 | 5,333 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,370 | 5,433 | 64 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,435 | 5,502 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,504 | 7,069 | 1,566 bp | + | 46.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,065 | 7,135 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,150 | 7,220 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,228 | 7,918 | 691 bp | + | 44.6% |
| tRNA-Lys | Transfer RNA | 7,919 | 7,991 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,993 | 8,160 | 168 bp | + | 39.3% |
| ATP6 | Protein-coding gene | 8,151 | 8,834 | 684 bp | + | 47.4% |
| COX3 | Protein-coding gene | 8,834 | 9,618 | 785 bp | + | 48.0% |
| tRNA-Gly | Transfer RNA | 9,619 | 9,690 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,691 | 10,039 | 349 bp | + | 48.7% |
| tRNA-Arg | Transfer RNA | 10,040 | 10,108 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,109 | 10,405 | 297 bp | + | 49.5% |
| ND4 | Protein-coding gene | 10,399 | 11,779 | 1,381 bp | + | 45.7% |
| tRNA-His | Transfer RNA | 11,780 | 11,849 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,850 | 11,916 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,921 | 11,993 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,994 | 13,832 | 1,839 bp | + | 46.1% |
| ND6 | Protein-coding gene | 13,829 | 14,350 | 522 bp | − | 46.4% |
| tRNA-Glu | Transfer RNA | 14,351 | 14,419 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,424 | 15,564 | 1,141 bp | + | 47.5% |
| tRNA-Thr | Transfer RNA | 15,565 | 15,637 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,637 | 15,707 | 71 bp | − | – |
| D-loop | Control region | 15,708 | 17,142 | 1,435 bp | – | 40.7% |