Hippoglossoides elassodon
Flathead sole
GC content
46.32%
Whole genome
Non-coding
1,614 bp
Including the D-loop
Where Flathead sole sits among 2,335 species
Whole-genome GC content against maximum lifespan. Flathead sole has the 557th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,216 bp
- GC skew (G − C) / (G + C)
- −0.241
- AT skew (A − T) / (A + T)
- +0.010
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,216 bp
Protein-coding11,390 bp
12S rRNA949 bp
16S rRNA1,715 bp
All tRNA1,548 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.00% | −0.274 | −0.116 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 49.76% | −0.412 | −0.044 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 46.54% | −0.182 | −0.089 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 45.30% | −0.195 | +0.005 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 43.45% | −0.479 | +0.137 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.05% | −0.359 | −0.176 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.92% | −0.266 | −0.127 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.28% | −0.314 | −0.220 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.53% | −0.346 | −0.092 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.98% | −0.285 | −0.075 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,851 bp | 45.87% | −0.296 | −0.002 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 48.56% | −0.365 | +0.378 | |||||
| CYTBCytochrome b | 1,141 bp | 47.77% | −0.325 | −0.148 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 48.37% | −0.068 | +0.204 | |||||
| 16S rRNA16S ribosomal RNA | 1,715 bp | 46.71% | −0.104 | +0.197 |
Codon usage
Counts per codon, darker is more frequent3,813 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU119
UUC120
Leu L16.9%
UUA77
UUG23
CUU167
CUC168
CUA144
CUG64
Ile I6.9%
AUU153
AUC111
Met M3.9%
AUA84
AUG65
Val V6.4%
GUU81
GUC60
GUA69
GUG34
Ser S6.6%
UCU57
UCC63
UCA54
UCG21
AGU11
AGC44
Pro P5.9%
CCU62
CCC87
CCA59
CCG18
Thr T7.5%
ACU55
ACC97
ACA111
ACG23
Ala A9.3%
GCU73
GCC133
GCA131
GCG18
Tyr Y2.9%
UAU39
UAC71
His H2.7%
CAU25
CAC79
Gln Q2.5%
CAA76
CAG19
Asn N3.0%
AAU29
AAC87
Lys K2.0%
AAA59
AAG16
Asp D2.1%
GAU22
GAC58
Glu E2.5%
GAA61
GAG35
Cys C0.6%
UGU11
UGC13
Trp W3.2%
UGA88
UGG33
Arg R2.0%
CGU12
CGC16
CGA35
CGG13
Gly G6.6%
GGU40
GGC96
GGA58
GGG59
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_082804.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 48.4% |
| tRNA-Val | Transfer RNA | 1,018 | 1,090 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,805 | 1,715 bp | + | 46.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,806 | 2,879 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,880 | 3,854 | 975 bp | + | 48.0% |
| tRNA-Ile | Transfer RNA | 3,860 | 3,929 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,929 | 3,999 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,999 | 4,067 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,068 | 5,112 | 1,045 bp | + | 49.8% |
| tRNA-Trp | Transfer RNA | 5,113 | 5,184 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,186 | 5,254 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,256 | 5,328 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,367 | 5,431 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,432 | 5,499 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,501 | 7,060 | 1,560 bp | + | 46.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,061 | 7,131 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,146 | 7,216 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,223 | 7,913 | 691 bp | + | 45.3% |
| tRNA-Lys | Transfer RNA | 7,914 | 7,986 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,988 | 8,155 | 168 bp | + | 43.5% |
| ATP6 | Protein-coding gene | 8,146 | 8,829 | 684 bp | + | 46.1% |
| COX3 | Protein-coding gene | 8,829 | 9,613 | 785 bp | + | 48.9% |
| tRNA-Gly | Transfer RNA | 9,614 | 9,685 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,686 | 10,034 | 349 bp | + | 49.3% |
| tRNA-Arg | Transfer RNA | 10,035 | 10,103 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,104 | 10,400 | 297 bp | + | 52.5% |
| ND4 | Protein-coding gene | 10,394 | 11,774 | 1,381 bp | + | 46.0% |
| tRNA-His | Transfer RNA | 11,775 | 11,844 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,845 | 11,911 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,916 | 11,988 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,989 | 13,839 | 1,851 bp | + | 45.9% |
| ND6 | Protein-coding gene | 13,802 | 14,320 | 519 bp | − | 48.6% |
| tRNA-Glu | Transfer RNA | 14,321 | 14,389 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,394 | 15,534 | 1,141 bp | + | 47.8% |
| tRNA-Thr | Transfer RNA | 15,535 | 15,607 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,607 | 15,677 | 71 bp | − | – |