MitoAge

Isurus oxyrinchus

Shortfin mako

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Maximum lifespan
25 yr
AnAge record
mtDNA size
16,701 bp
RefSeq NC_022691.1
GC content
43.23%
Whole genome
Non-coding
1,124 bp
D-loop 1,064 bp

Where Shortfin mako sits among 2,335 species

Whole-genome GC content against maximum lifespan. Shortfin mako has the 632nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Shortfin mako
  • This species
  • Other sharks and rays
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,701 bp
GC skew (G − C) / (G + C)
−0.297
AT skew (A − T) / (A + T)
+0.015

Life history

Maximum lifespan
25 years
Adult weight
278.2 kg
Female sexual maturity
15 years
Litter or clutch size
12.5

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01798)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,701 bp
Protein-coding11,402 bp
12S rRNA957 bp
16S rRNA1,672 bp
All tRNA1,550 bp
D-loop1,064 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp26.1%29.1%14.3%30.6%44.82%−0.364−0.056
ND2NADH dehydrogenase subunit 21,043 bp26.7%27.1%12.2%33.9%46.12%−0.472−0.007
COX1Cytochrome c oxidase subunit I1,554 bp25.0%29.0%18.3%27.7%46.01%−0.206−0.073
COX2Cytochrome c oxidase subunit II691 bp29.5%27.1%16.8%26.6%43.42%−0.227+0.043
ATP8ATP synthase F0 subunit 8168 bp35.7%27.4%9.5%27.4%36.91%−0.484+0.132
ATP6ATP synthase F0 subunit 6684 bp27.0%30.4%12.6%30.0%42.54%−0.409−0.059
COX3Cytochrome c oxidase subunit III786 bp26.2%28.2%16.8%28.8%45.55%−0.263−0.037
ND3NADH dehydrogenase subunit 3349 bp20.6%31.8%16.6%30.9%47.56%−0.301−0.213
ND4LNADH dehydrogenase subunit 4L297 bp22.9%30.3%14.1%32.7%46.80%−0.396−0.139
ND4NADH dehydrogenase subunit 41,381 bp26.1%28.7%13.8%31.4%45.11%−0.390−0.047
ND5NADH dehydrogenase subunit 51,830 bp28.1%28.1%12.1%31.6%43.77%−0.446+0.001
ND6NADH dehydrogenase subunit 6522 bp38.7%18.0%10.7%32.6%43.30%−0.504+0.365
CYTBCytochrome b1,145 bp24.9%29.8%13.1%32.2%45.33%−0.422−0.089
12S rRNA12S ribosomal RNA957 bp33.3%23.4%19.3%23.9%43.26%−0.106+0.175
16S rRNA16S ribosomal RNA1,672 bp35.3%26.0%17.5%21.2%38.70%−0.094+0.151
D-loopControl region (D-loop)1,064 bp29.4%32.3%15.1%23.1%38.25%−0.209−0.047

Codon usage

Counts per codon, darker is more frequent

3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU107
UUC127
Leu L17.7%
UUA99
UUG35
CUU122
CUC164
CUA199
CUG55
Ile I8.3%
AUU158
AUC157
Met M4.5%
AUA120
AUG50
Val V5.4%
GUU52
GUC66
GUA53
GUG36
Ser S7.3%
UCU45
UCC95
UCA76
UCG4
AGU19
AGC38
Pro P5.5%
CCU55
CCC91
CCA57
CCG7
Thr T7.0%
ACU50
ACC106
ACA98
ACG11
Ala A7.5%
GCU54
GCC139
GCA82
GCG10
Tyr Y3.2%
UAU47
UAC73
His H2.7%
CAU31
CAC70
Gln Q2.7%
CAA82
CAG19
Asn N3.6%
AAU41
AAC96
Lys K2.1%
AAA73
AAG8
Asp D1.9%
GAU26
GAC47
Glu E2.7%
GAA80
GAG22
Cys C0.7%
UGU10
UGC15
Trp W3.2%
UGA91
UGG30
Arg R1.9%
CGU12
CGC16
CGA40
CGG4
Gly G6.0%
GGU40
GGC82
GGA66
GGG40
Stop 0.2%
UAA6
UAG1
AGA0
AGG1

Genome map

38 annotated features in NC_022691.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (43.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,027957 bp+43.3%
tRNA-ValTransfer RNA1,0251,09672 bp+–
16S rRNARibosomal RNA1,0972,7681,672 bp+38.7%
tRNA-Leu (UUR)Transfer RNA2,7682,84275 bp+–
ND1Protein-coding gene2,8433,817975 bp+44.8%
tRNA-IleTransfer RNA3,8203,88970 bp+–
tRNA-GlnTransfer RNA3,8883,95972 bp−–
tRNA-MetTransfer RNA3,9604,02869 bp+–
ND2Protein-coding gene4,0295,0711,043 bp+46.1%
tRNA-TrpTransfer RNA5,0725,14271 bp+–
tRNA-AlaTransfer RNA5,1445,21269 bp−–
tRNA-AsnTransfer RNA5,2165,28873 bp−–
tRNA-CysTransfer RNA5,3225,38867 bp−–
tRNA-TyrTransfer RNA5,3905,45970 bp−–
COX1Protein-coding gene5,4617,0141,554 bp+46.0%
tRNA-Ser (UCN)Transfer RNA7,0177,08771 bp−–
tRNA-AspTransfer RNA7,0927,16271 bp+–
COX2Protein-coding gene7,1697,859691 bp+43.4%
tRNA-LysTransfer RNA7,8607,93374 bp+–
ATP8Protein-coding gene7,9358,102168 bp+36.9%
ATP6Protein-coding gene8,0938,776684 bp+42.5%
COX3Protein-coding gene8,7769,561786 bp+45.6%
tRNA-GlyTransfer RNA9,5649,63370 bp+–
ND3Protein-coding gene9,6349,982349 bp+47.6%
tRNA-ArgTransfer RNA9,98310,05270 bp+–
ND4LProtein-coding gene10,05310,349297 bp+46.8%
ND4Protein-coding gene10,34311,7231,381 bp+45.1%
tRNA-HisTransfer RNA11,72411,79269 bp+–
tRNA-Ser (AGY)Transfer RNA11,79311,85967 bp+–
tRNA-Leu (CUN)Transfer RNA11,86011,93172 bp+–
ND5Protein-coding gene11,93213,7611,830 bp+43.8%
ND6Protein-coding gene13,75714,278522 bp−43.3%
tRNA-GluTransfer RNA14,27914,34870 bp−–
CYTBProtein-coding gene14,35115,4951,145 bp+45.3%
tRNA-ThrTransfer RNA15,49615,56671 bp+–
tRNA-ProTransfer RNA15,56915,63769 bp−–
D-loopControl region15,63816,7011,064 bp–38.3%

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