MitoAge

Leiothrix lutea

Red-billed leiothrix

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Maximum lifespan
15 yr
AnAge record
mtDNA size
17,615 bp
RefSeq NC_020427.1
GC content
46.05%
Whole genome
Non-coding
2,121 bp
D-loop 2,035 bp

Where Red-billed leiothrix sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red-billed leiothrix has the 1,219th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Red-billed leiothrix
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,615 bp
GC skew (G − C) / (G + C)
−0.376
AT skew (A − T) / (A + T)
+0.106

Life history

Maximum lifespan
15 years
Adult weight
21.5 g
Birth weight
3.1 g
Gestation or incubation
12 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00965)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,615 bp
Protein-coding11,378 bp
12S rRNA985 bp
16S rRNA1,602 bp
All tRNA1,538 bp
D-loop2,035 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp25.4%25.5%14.6%34.6%49.18%−0.405−0.002
ND2NADH dehydrogenase subunit 21,040 bp31.1%24.0%10.8%34.1%44.90%−0.520+0.127
COX1Cytochrome c oxidase subunit I1,551 bp27.3%24.8%17.2%30.8%47.97%−0.285+0.048
COX2Cytochrome c oxidase subunit II684 bp32.0%22.1%14.9%31.0%45.91%−0.350+0.184
ATP8ATP synthase F0 subunit 8168 bp32.7%23.8%7.1%36.3%43.45%−0.671+0.158
ATP6ATP synthase F0 subunit 6684 bp29.5%25.6%9.8%35.1%44.88%−0.564+0.072
COX3Cytochrome c oxidase subunit III784 bp26.8%24.1%15.3%33.8%49.11%−0.377+0.053
ND3NADH dehydrogenase subunit 3351 bp27.9%23.6%13.1%35.3%48.43%−0.459+0.083
ND4LNADH dehydrogenase subunit 4L297 bp24.9%23.2%12.8%39.1%51.85%−0.506+0.035
ND4NADH dehydrogenase subunit 41,378 bp30.8%23.8%10.4%35.0%45.36%−0.542+0.129
ND5NADH dehydrogenase subunit 51,818 bp31.4%24.1%11.6%32.9%44.55%−0.479+0.131
ND6NADH dehydrogenase subunit 6519 bp38.2%13.3%9.2%39.3%48.56%−0.619+0.483
CYTBCytochrome b1,143 bp28.1%25.4%13.5%33.1%46.54%−0.421+0.051
12S rRNA12S ribosomal RNA985 bp30.9%20.5%21.6%27.0%48.63%−0.111+0.202
16S rRNA16S ribosomal RNA1,602 bp33.7%21.7%19.6%25.0%44.63%−0.122+0.218
D-loopControl region (D-loop)2,035 bp25.4%28.7%13.5%32.4%45.90%−0.413−0.063

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU47
UUC172
Leu L17.4%
UUA49
UUG16
CUU71
CUC151
CUA326
CUG48
Ile I8.1%
AUU85
AUC222
Met M4.3%
AUA127
AUG35
Val V5.1%
GUU35
GUC51
GUA77
GUG30
Ser S7.2%
UCU31
UCC92
UCA87
UCG6
AGU11
AGC46
Pro P6.0%
CCU35
CCC79
CCA105
CCG9
Thr T8.5%
ACU55
ACC126
ACA130
ACG11
Ala A8.0%
GCU57
GCC142
GCA93
GCG11
Tyr Y3.0%
UAU25
UAC89
His H2.7%
CAU21
CAC81
Gln Q2.6%
CAA86
CAG11
Asn N3.5%
AAU16
AAC117
Lys K2.3%
AAA82
AAG5
Asp D1.8%
GAU13
GAC54
Glu E2.2%
GAA68
GAG15
Cys C0.8%
UGU4
UGC26
Trp W2.8%
UGA96
UGG12
Arg R1.9%
CGU6
CGC18
CGA43
CGG6
Gly G5.9%
GGU29
GGC65
GGA99
GGG32
Stop 0.3%
UAA6
UAG0
AGA1
AGG3

Genome map

39 annotated features in NC_020427.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,054985 bp+48.6%
tRNA-ValTransfer RNA1,0551,12369 bp+–
16S rRNARibosomal RNA1,1242,7251,602 bp+44.6%
tRNA-Leu (UUR)Transfer RNA2,7262,80075 bp+–
ND1Protein-coding gene2,8133,790978 bp+49.2%
tRNA-IleTransfer RNA3,7963,86873 bp+–
tRNA-GlnTransfer RNA3,8773,94771 bp−–
tRNA-MetTransfer RNA3,9474,01569 bp+–
ND2Protein-coding gene4,0165,0551,040 bp+44.9%
tRNA-TrpTransfer RNA5,0565,12570 bp+–
tRNA-AlaTransfer RNA5,1275,19569 bp−–
tRNA-AsnTransfer RNA5,2065,27873 bp−–
tRNA-CysTransfer RNA5,2815,34666 bp−–
tRNA-TyrTransfer RNA5,3465,41671 bp−–
COX1Protein-coding gene5,4186,9681,551 bp+48.0%
tRNA-Ser (UCN)Transfer RNA6,9607,03172 bp−–
tRNA-AspTransfer RNA7,0367,10469 bp+–
COX2Protein-coding gene7,1137,796684 bp+45.9%
tRNA-LysTransfer RNA7,7987,86669 bp+–
ATP8Protein-coding gene7,8688,035168 bp+43.5%
ATP6Protein-coding gene8,0268,709684 bp+44.9%
COX3Protein-coding gene8,7189,501784 bp+49.1%
tRNA-GlyTransfer RNA9,5029,57069 bp+–
ND3Protein-coding gene9,5719,921351 bp+48.4%
tRNA-ArgTransfer RNA9,9299,99870 bp+–
ND4LProtein-coding gene10,00010,296297 bp+51.9%
ND4Protein-coding gene10,29011,6671,378 bp+45.4%
tRNA-HisTransfer RNA11,66811,73770 bp+–
tRNA-Ser (AGY)Transfer RNA11,73811,80265 bp+–
tRNA-Leu (CUN)Transfer RNA11,80211,87271 bp+–
ND5Protein-coding gene11,87313,6901,818 bp+44.6%
CYTBProtein-coding gene13,69914,8411,143 bp+46.5%
tRNA-ThrTransfer RNA14,84514,91369 bp+–
D-loopControl region14,91415,9901,077 bp–45.9%
tRNA-ProTransfer RNA15,99116,05969 bp−–
ND6Protein-coding gene16,06516,583519 bp−48.6%
tRNA-GluTransfer RNA16,58516,65773 bp−–
D-loopControl region16,65817,615958 bp–45.9%

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