Limanda sakhalinensis
Sakhalin sole
GC content
46.52%
Whole genome
Non-coding
1,583 bp
Including the D-loop
Where Sakhalin sole sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sakhalin sole has the 1,777th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,186 bp
- GC skew (G − C) / (G + C)
- −0.241
- AT skew (A − T) / (A + T)
- +0.010
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,186 bp
Protein-coding11,390 bp
12S rRNA949 bp
16S rRNA1,716 bp
All tRNA1,548 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.28% | −0.271 | −0.121 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 49.86% | −0.413 | −0.053 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 46.86% | −0.176 | −0.066 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 45.88% | −0.205 | 0.000 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.465 | +0.113 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.05% | −0.352 | −0.171 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.28% | −0.245 | −0.123 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.14% | −0.291 | −0.230 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.52% | −0.359 | −0.139 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 47.14% | −0.296 | −0.068 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,851 bp | 46.14% | −0.293 | +0.005 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 47.59% | −0.336 | +0.368 | |||||
| CYTBCytochrome b | 1,141 bp | 46.54% | −0.326 | −0.134 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 48.16% | −0.077 | +0.211 | |||||
| 16S rRNA16S ribosomal RNA | 1,716 bp | 46.97% | −0.104 | +0.202 |
Codon usage
Counts per codon, darker is more frequent3,813 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU128
UUC111
Leu L16.8%
UUA82
UUG24
CUU167
CUC165
CUA138
CUG66
Ile I6.9%
AUU144
AUC120
Met M3.9%
AUA76
AUG74
Val V6.4%
GUU77
GUC60
GUA71
GUG35
Ser S6.5%
UCU54
UCC62
UCA55
UCG21
AGU13
AGC41
Pro P6.0%
CCU62
CCC88
CCA60
CCG17
Thr T7.5%
ACU49
ACC102
ACA115
ACG19
Ala A9.4%
GCU74
GCC141
GCA129
GCG16
Tyr Y2.9%
UAU44
UAC66
His H2.7%
CAU21
CAC83
Gln Q2.5%
CAA82
CAG14
Asn N3.1%
AAU28
AAC90
Lys K2.0%
AAA56
AAG19
Asp D2.0%
GAU17
GAC61
Glu E2.5%
GAA63
GAG33
Cys C0.6%
UGU9
UGC15
Trp W3.2%
UGA95
UGG26
Arg R2.0%
CGU15
CGC12
CGA37
CGG12
Gly G6.6%
GGU42
GGC88
GGA57
GGG65
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_082768.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,018 | 1,090 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,806 | 1,716 bp | + | 47.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,807 | 2,880 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,881 | 3,855 | 975 bp | + | 47.3% |
| tRNA-Ile | Transfer RNA | 3,861 | 3,930 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,930 | 4,000 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,000 | 4,068 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,069 | 5,113 | 1,045 bp | + | 49.9% |
| tRNA-Trp | Transfer RNA | 5,114 | 5,185 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,187 | 5,255 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,257 | 5,329 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,368 | 5,432 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,433 | 5,500 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,502 | 7,061 | 1,560 bp | + | 46.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,062 | 7,132 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,147 | 7,217 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,224 | 7,914 | 691 bp | + | 45.9% |
| tRNA-Lys | Transfer RNA | 7,915 | 7,987 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,989 | 8,156 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,147 | 8,830 | 684 bp | + | 46.1% |
| COX3 | Protein-coding gene | 8,830 | 9,614 | 785 bp | + | 48.3% |
| tRNA-Gly | Transfer RNA | 9,615 | 9,686 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,687 | 10,035 | 349 bp | + | 50.1% |
| tRNA-Arg | Transfer RNA | 10,036 | 10,104 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 51.5% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 47.1% |
| tRNA-His | Transfer RNA | 11,776 | 11,845 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,846 | 11,912 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,917 | 11,989 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,990 | 13,840 | 1,851 bp | + | 46.1% |
| ND6 | Protein-coding gene | 13,803 | 14,321 | 519 bp | − | 47.6% |
| tRNA-Glu | Transfer RNA | 14,322 | 14,390 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,395 | 15,535 | 1,141 bp | + | 46.5% |
| tRNA-Thr | Transfer RNA | 15,536 | 15,608 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,608 | 15,678 | 71 bp | − | – |