Lonchura striata

White-rumped munia

Maximum lifespan

10 yr

AnAge record

mtDNA size

16,813 bp

RefSeq NC_029475.1

GC content

45.10%

Whole genome

Non-coding

1,328 bp

D-loop 1,246 bp

Where White-rumped munia sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-rumped munia has the 1,577th longest lifespan of them.

This species
Other birds
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,813 bp

GC skew (G − C) / (G + C): −0.392
AT skew (A − T) / (A + T): +0.155

Life history

Maximum lifespan: 10 years
Adult weight: 12.3 g
Basal metabolic rate: 0.215 W
Postnatal growth rate: 0.219 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00871)

About this record

Lifespan source: AnAge build 15
Based on: an observed animal, origin not stated
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,813 bp

Protein-coding11,375 bp

12S rRNA981 bp

16S rRNA1,592 bp

All tRNA1,553 bp

D-loop1,246 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Lonchura striata genes

ND1NADH dehydrogenase subunit 1	975 bp	29.8%	25.2%	12.8%	32.1%	44.92%	−0.429	+0.084
ND2NADH dehydrogenase subunit 2	1,040 bp	33.2%	23.8%	9.4%	33.7%	43.08%	−0.563	+0.166
COX1Cytochrome c oxidase subunit I	1,551 bp	29.6%	24.5%	16.2%	29.7%	45.91%	−0.295	+0.094
COX2Cytochrome c oxidase subunit II	684 bp	32.3%	20.8%	13.7%	33.2%	46.93%	−0.414	+0.218
ATP8ATP synthase F0 subunit 8	168 bp	32.1%	25.6%	8.3%	33.9%	42.26%	−0.606	+0.113
ATP6ATP synthase F0 subunit 6	684 bp	30.7%	25.1%	9.4%	34.8%	44.15%	−0.576	+0.099
COX3Cytochrome c oxidase subunit III	784 bp	28.2%	23.5%	14.9%	33.4%	48.34%	−0.383	+0.091
ND3NADH dehydrogenase subunit 3	351 bp	31.6%	24.2%	10.8%	33.3%	44.16%	−0.510	+0.133
ND4LNADH dehydrogenase subunit 4L	297 bp	27.3%	25.3%	12.1%	35.4%	47.48%	−0.489	+0.038
ND4NADH dehydrogenase subunit 4	1,378 bp	32.4%	21.8%	10.2%	35.6%	45.72%	−0.556	+0.195
ND5NADH dehydrogenase subunit 5	1,818 bp	32.2%	22.3%	11.4%	34.1%	45.55%	−0.498	+0.182
ND6NADH dehydrogenase subunit 6	519 bp	42.0%	11.9%	7.1%	38.9%	46.05%	−0.690	+0.557
CYTBCytochrome b	1,143 bp	29.7%	23.7%	12.5%	34.1%	46.63%	−0.463	+0.111
12S rRNA12S ribosomal RNA	981 bp	29.7%	20.3%	21.4%	28.6%	50.05%	−0.145	+0.188
16S rRNA16S ribosomal RNA	1,592 bp	34.7%	21.0%	20.0%	24.2%	44.22%	−0.097	+0.246
D-loopControl region (D-loop)	1,246 bp	29.3%	27.7%	12.8%	30.2%	43.02%	−0.403	+0.028

Codon usage

Counts per codon, darker is more frequent

Gene

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%

UUU40

UUC181

Leu L17.1%

UUA69

UUG17

CUU60

CUC110

CUA363

CUG32

Ile I7.9%

AUU72

AUC226

Met M4.5%

AUA139

AUG30

Val V5.0%

GUU32

GUC53

GUA88

GUG15

Ser S7.9%

UCU26

UCC102

UCA106

UCG8

AGU8

AGC49

Pro P5.8%

CCU23

CCC84

CCA113

CCG2

Thr T8.4%

ACU30

ACC141

ACA145

ACG2

Ala A7.9%

GCU35

GCC161

GCA97

GCG7

Tyr Y2.8%

UAU30

UAC78

His H2.8%

CAU25

CAC81

Gln Q2.6%

CAA96

CAG4

Asn N3.5%

AAU18

AAC116

Lys K2.3%

AAA86

AAG0

Asp D1.8%

GAU12

GAC56

Glu E2.4%

GAA80

GAG12

Cys C0.8%

UGU7

UGC23

Trp W2.8%

UGA99

UGG8

Arg R1.8%

CGU3

CGC11

CGA49

CGG5

Gly G5.8%

GGU17

GGC52

GGA121

GGG31

Stop 0.3%

UAA6

UAG1

AGA2

AGG1

Genome map

38 annotated features in NC_029475.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Lonchura striata (NC_029475.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	70	70 bp	+	–
12S rRNA	Ribosomal RNA	71	1,051	981 bp	+	50.1%
tRNA-Val	Transfer RNA	1,046	1,115	70 bp	+	–
16S rRNA	Ribosomal RNA	1,116	2,707	1,592 bp	+	44.2%
tRNA-Leu (UUR)	Transfer RNA	2,707	2,781	75 bp	+	–
ND1	Protein-coding gene	2,794	3,768	975 bp	+	44.9%
tRNA-Ile	Transfer RNA	3,774	3,846	73 bp	+	–
tRNA-Gln	Transfer RNA	3,852	3,922	71 bp	−	–
tRNA-Met	Transfer RNA	3,922	3,990	69 bp	+	–
ND2	Protein-coding gene	3,991	5,030	1,040 bp	+	43.1%
tRNA-Trp	Transfer RNA	5,031	5,100	70 bp	+	–
tRNA-Ala	Transfer RNA	5,102	5,170	69 bp	−	–
tRNA-Asn	Transfer RNA	5,179	5,251	73 bp	−	–
tRNA-Cys	Transfer RNA	5,253	5,319	67 bp	−	–
tRNA-Tyr	Transfer RNA	5,319	5,389	71 bp	−	–
COX1	Protein-coding gene	5,391	6,941	1,551 bp	+	45.9%
tRNA-Ser (UCN)	Transfer RNA	6,933	7,005	73 bp	−	–
tRNA-Asp	Transfer RNA	7,011	7,089	79 bp	+	–
COX2	Protein-coding gene	7,090	7,773	684 bp	+	46.9%
tRNA-Lys	Transfer RNA	7,785	7,853	69 bp	+	–
ATP8	Protein-coding gene	7,855	8,022	168 bp	+	42.3%
ATP6	Protein-coding gene	8,013	8,696	684 bp	+	44.2%
COX3	Protein-coding gene	8,701	9,484	784 bp	+	48.3%
tRNA-Gly	Transfer RNA	9,485	9,553	69 bp	+	–
ND3	Protein-coding gene	9,554	9,904	351 bp	+	44.2%
tRNA-Arg	Transfer RNA	9,906	9,974	69 bp	+	–
ND4L	Protein-coding gene	9,976	10,272	297 bp	+	47.5%
ND4	Protein-coding gene	10,266	11,643	1,378 bp	+	45.7%
tRNA-His	Transfer RNA	11,644	11,713	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,714	11,779	66 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,779	11,849	71 bp	+	–
ND5	Protein-coding gene	11,850	13,667	1,818 bp	+	45.6%
CYTB	Protein-coding gene	13,676	14,818	1,143 bp	+	46.6%
tRNA-Thr	Transfer RNA	14,822	14,890	69 bp	+	–
tRNA-Pro	Transfer RNA	14,899	14,969	71 bp	−	–
ND6	Protein-coding gene	14,976	15,494	519 bp	−	46.1%
tRNA-Glu	Transfer RNA	15,496	15,567	72 bp	−	–
D-loop	Control region	15,568	16,813	1,246 bp	–	43.0%