Lyopsetta exilis
Slender sole
GC content
46.38%
Whole genome
Non-coding
1,447 bp
Including the D-loop
Where Slender sole sits among 2,335 species
Whole-genome GC content against maximum lifespan. Slender sole has the 940th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,077 bp
- GC skew (G − C) / (G + C)
- −0.286
- AT skew (A − T) / (A + T)
- +0.036
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,077 bp
Protein-coding11,416 bp
12S rRNA952 bp
16S rRNA1,714 bp
All tRNA1,548 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.49% | −0.330 | −0.078 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 48.57% | −0.492 | +0.030 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 47.18% | −0.198 | −0.068 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.28% | −0.229 | +0.044 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 39.29% | −0.485 | +0.098 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 48.83% | −0.395 | −0.074 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.30% | −0.302 | −0.085 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.71% | −0.341 | −0.173 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.429 | −0.105 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 47.29% | −0.354 | −0.025 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.00% | −0.352 | −0.001 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.40% | −0.502 | +0.460 | |||||
| CYTBCytochrome b | 1,141 bp | 46.71% | −0.362 | −0.099 | |||||
| 12S rRNA12S ribosomal RNA | 952 bp | 48.21% | −0.098 | +0.213 | |||||
| 16S rRNA16S ribosomal RNA | 1,714 bp | 46.09% | −0.119 | +0.221 |
Codon usage
Counts per codon, darker is more frequent3,810 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU119
UUC120
Leu L17.3%
UUA89
UUG31
CUU148
CUC182
CUA161
CUG48
Ile I6.9%
AUU134
AUC127
Met M4.0%
AUA101
AUG51
Val V6.1%
GUU73
GUC70
GUA67
GUG24
Ser S6.5%
UCU47
UCC63
UCA68
UCG12
AGU8
AGC50
Pro P5.9%
CCU47
CCC111
CCA56
CCG11
Thr T7.5%
ACU50
ACC108
ACA114
ACG13
Ala A9.2%
GCU72
GCC136
GCA127
GCG15
Tyr Y2.9%
UAU27
UAC84
His H2.8%
CAU25
CAC81
Gln Q2.5%
CAA81
CAG13
Asn N3.0%
AAU26
AAC89
Lys K2.0%
AAA70
AAG5
Asp D2.0%
GAU21
GAC55
Glu E2.6%
GAA78
GAG22
Cys C0.6%
UGU5
UGC19
Trp W3.2%
UGA90
UGG32
Arg R2.1%
CGU6
CGC18
CGA44
CGG11
Gly G6.5%
GGU35
GGC104
GGA53
GGG56
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
37 annotated features in NC_082803.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,020 | 952 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,021 | 1,092 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,093 | 2,806 | 1,714 bp | + | 46.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,807 | 2,880 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,881 | 3,855 | 975 bp | + | 47.5% |
| tRNA-Ile | Transfer RNA | 3,861 | 3,931 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,931 | 4,001 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,001 | 4,069 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,070 | 5,115 | 1,046 bp | + | 48.6% |
| tRNA-Trp | Transfer RNA | 5,116 | 5,187 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,189 | 5,257 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,259 | 5,331 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,367 | 5,431 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,432 | 5,499 | 68 bp | − | – |
| COX1 | Protein-coding gene | 5,501 | 7,060 | 1,560 bp | + | 47.2% |
| tRNA-Ser (UCN) | Transfer RNA | 7,061 | 7,131 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,146 | 7,216 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,224 | 7,914 | 691 bp | + | 44.3% |
| tRNA-Lys | Transfer RNA | 7,915 | 7,987 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,989 | 8,156 | 168 bp | + | 39.3% |
| ATP6 | Protein-coding gene | 8,147 | 8,830 | 684 bp | + | 48.8% |
| COX3 | Protein-coding gene | 8,830 | 9,614 | 785 bp | + | 49.3% |
| tRNA-Gly | Transfer RNA | 9,615 | 9,686 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,687 | 10,035 | 349 bp | + | 48.7% |
| tRNA-Arg | Transfer RNA | 10,036 | 10,104 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 47.3% |
| tRNA-His | Transfer RNA | 11,776 | 11,845 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,846 | 11,912 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,917 | 11,989 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,990 | 13,828 | 1,839 bp | + | 46.0% |
| ND6 | Protein-coding gene | 13,825 | 14,346 | 522 bp | − | 45.4% |
| tRNA-Glu | Transfer RNA | 14,347 | 14,415 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,420 | 15,560 | 1,141 bp | + | 46.7% |
| tRNA-Thr | Transfer RNA | 15,561 | 15,633 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,633 | 15,703 | 71 bp | − | – |