MitoAge

Mazama americana

Red brocket

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Maximum lifespan
17.1 yr
AnAge record
mtDNA size
16,478 bp
RefSeq NC_020719.1
GC content
36.70%
Whole genome
Non-coding
1,105 bp
D-loop 774 bp

Where Red brocket sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red brocket has the 1,087th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Red brocket
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,478 bp
GC skew (G − C) / (G + C)
−0.276
AT skew (A − T) / (A + T)
+0.061

Life history

Maximum lifespan
17.1 years
Adult weight
33 kg
Birth weight
538.5 g
Female sexual maturity
395 days
Male sexual maturity
365 days
Gestation or incubation
225 days
Litter or clutch size
1.3
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02028)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,478 bp
Protein-coding11,338 bp
12S rRNA954 bp
16S rRNA1,569 bp
All tRNA1,515 bp
D-loop774 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.9%31.8%11.8%24.5%36.30%−0.349+0.002
ND2NADH dehydrogenase subunit 21,042 bp36.8%29.8%8.7%24.7%33.40%−0.477+0.104
COX1Cytochrome c oxidase subunit I1,545 bp29.1%33.7%16.1%21.0%37.15%−0.132−0.073
COX2Cytochrome c oxidase subunit II684 bp34.8%30.4%13.6%21.2%34.80%−0.218+0.067
ATP8ATP synthase F0 subunit 8201 bp40.8%29.9%6.0%23.4%29.35%−0.593+0.155
ATP6ATP synthase F0 subunit 6681 bp31.1%30.4%11.9%26.6%38.47%−0.382+0.012
COX3Cytochrome c oxidase subunit III784 bp26.3%32.0%14.8%26.9%41.71%−0.291−0.098
ND3NADH dehydrogenase subunit 3346 bp30.1%30.9%12.7%26.3%39.02%−0.348−0.014
ND4LNADH dehydrogenase subunit 4L297 bp32.3%32.3%12.1%23.2%35.35%−0.3140.000
ND4NADH dehydrogenase subunit 41,378 bp32.2%32.7%10.7%24.3%35.05%−0.387−0.008
ND5NADH dehydrogenase subunit 51,821 bp33.8%30.9%10.7%24.7%35.37%−0.394+0.045
ND6NADH dehydrogenase subunit 6528 bp41.5%24.4%7.6%26.5%34.09%−0.556+0.259
CYTBCytochrome b1,140 bp31.8%28.9%12.5%26.8%39.21%−0.365+0.048
12S rRNA12S ribosomal RNA954 bp36.4%23.3%17.9%22.4%40.36%−0.112+0.220
16S rRNA16S ribosomal RNA1,569 bp38.1%24.9%16.9%20.1%36.97%−0.086+0.209
D-loopControl region (D-loop)774 bp32.4%30.0%15.4%22.2%37.60%−0.182+0.039

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.5%
UUU151
UUC97
Leu L15.4%
UUA157
UUG19
CUU92
CUC72
CUA226
CUG20
Ile I8.7%
AUU218
AUC114
Met M7.0%
AUA225
AUG41
Val V5.0%
GUU58
GUC31
GUA88
GUG14
Ser S7.3%
UCU69
UCC43
UCA105
UCG4
AGU17
AGC40
Pro P5.0%
CCU48
CCC52
CCA89
CCG2
Thr T8.3%
ACU81
ACC66
ACA161
ACG6
Ala A6.2%
GCU50
GCC78
GCA105
GCG4
Tyr Y3.4%
UAU88
UAC43
His H2.4%
CAU41
CAC51
Gln Q2.4%
CAA80
CAG12
Asn N4.4%
AAU91
AAC76
Lys K2.4%
AAA86
AAG7
Asp D1.7%
GAU32
GAC34
Glu E2.6%
GAA81
GAG17
Cys C0.7%
UGU8
UGC17
Trp W2.7%
UGA94
UGG10
Arg R1.7%
CGU6
CGC14
CGA41
CGG2
Gly G5.7%
GGU37
GGC50
GGA104
GGG26
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020719.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,023954 bp+40.4%
tRNA-ValTransfer RNA1,0241,09067 bp+–
16S rRNARibosomal RNA1,0912,6591,569 bp+37.0%
tRNA-Leu (UUR)Transfer RNA2,6602,73475 bp+–
ND1Protein-coding gene2,7373,692956 bp+36.3%
tRNA-IleTransfer RNA3,6933,76169 bp+–
tRNA-GlnTransfer RNA3,7593,83072 bp−–
tRNA-MetTransfer RNA3,8333,90169 bp+–
ND2Protein-coding gene3,9024,9431,042 bp+33.4%
tRNA-TrpTransfer RNA4,9445,01168 bp+–
tRNA-AlaTransfer RNA5,0135,08169 bp−–
tRNA-AsnTransfer RNA5,0835,15573 bp−–
tRNA-CysTransfer RNA5,1885,25467 bp−–
tRNA-TyrTransfer RNA5,2555,32470 bp−–
COX1Protein-coding gene5,3266,8701,545 bp+37.2%
tRNA-Ser (UCN)Transfer RNA6,8686,93871 bp−–
tRNA-AspTransfer RNA6,9447,01168 bp+–
COX2Protein-coding gene7,0137,696684 bp+34.8%
tRNA-LysTransfer RNA7,7007,76869 bp+–
ATP8Protein-coding gene7,7707,970201 bp+29.4%
ATP6Protein-coding gene7,9318,611681 bp+38.5%
COX3Protein-coding gene8,6119,394784 bp+41.7%
tRNA-GlyTransfer RNA9,3959,46369 bp+–
ND3Protein-coding gene9,4649,809346 bp+39.0%
tRNA-ArgTransfer RNA9,8109,87970 bp+–
ND4LProtein-coding gene9,88010,176297 bp+35.4%
ND4Protein-coding gene10,17011,5471,378 bp+35.1%
tRNA-HisTransfer RNA11,54811,61669 bp+–
tRNA-Ser (AGY)Transfer RNA11,61711,67660 bp+–
tRNA-Leu (CUN)Transfer RNA11,67811,74770 bp+–
ND5Protein-coding gene11,74813,5681,821 bp+35.4%
ND6Protein-coding gene13,55214,079528 bp−34.1%
tRNA-GluTransfer RNA14,08014,14869 bp−–
CYTBProtein-coding gene14,15315,2921,140 bp+39.2%
tRNA-ThrTransfer RNA15,29615,36570 bp+–
tRNA-ProTransfer RNA15,36515,43066 bp−–
D-loopControl region15,43616,209774 bp–37.6%

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