Mustelus griseus

Spotless smooth-hound

Maximum lifespan

9 yr

AnAge record

mtDNA size

16,754 bp

RefSeq NC_023527.1

GC content

38.98%

Whole genome

Non-coding

1,175 bp

D-loop 1,119 bp

Where Spotless smooth-hound sits among 2,335 species

Whole-genome GC content against maximum lifespan. Spotless smooth-hound has the 1,659th longest lifespan of them.

This species
Other sharks and rays
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,754 bp

GC skew (G − C) / (G + C): −0.280
AT skew (A − T) / (A + T): +0.007

Life history

Maximum lifespan: 9 years
Female sexual maturity: 5.6 years
Male sexual maturity: 6 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01782)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,754 bp

Protein-coding11,407 bp

12S rRNA951 bp

16S rRNA1,668 bp

All tRNA1,553 bp

D-loop1,119 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Mustelus griseus genes

ND1NADH dehydrogenase subunit 1	975 bp	29.3%	31.5%	12.0%	27.2%	39.18%	−0.387	−0.035
ND2NADH dehydrogenase subunit 2	1,045 bp	30.0%	30.8%	10.3%	28.8%	39.14%	−0.472	−0.013
COX1Cytochrome c oxidase subunit I	1,557 bp	26.9%	33.3%	16.3%	23.4%	39.76%	−0.179	−0.107
COX2Cytochrome c oxidase subunit II	691 bp	31.4%	29.5%	15.3%	23.7%	39.07%	−0.215	+0.031
ATP8ATP synthase F0 subunit 8	168 bp	37.5%	33.9%	7.1%	21.4%	28.57%	−0.500	+0.050
ATP6ATP synthase F0 subunit 6	684 bp	30.4%	33.9%	10.4%	25.3%	35.67%	−0.418	−0.055
COX3Cytochrome c oxidase subunit III	786 bp	28.1%	30.0%	15.8%	26.1%	41.86%	−0.246	−0.033
ND3NADH dehydrogenase subunit 3	349 bp	23.8%	34.4%	14.9%	26.9%	41.83%	−0.288	−0.182
ND4LNADH dehydrogenase subunit 4L	297 bp	26.3%	31.3%	11.8%	30.6%	42.42%	−0.444	−0.088
ND4NADH dehydrogenase subunit 4	1,381 bp	29.2%	32.2%	12.2%	26.4%	38.60%	−0.366	−0.050
ND5NADH dehydrogenase subunit 5	1,830 bp	31.7%	31.5%	10.4%	26.4%	36.78%	−0.435	+0.003
ND6NADH dehydrogenase subunit 6	522 bp	41.0%	19.7%	9.6%	29.7%	39.27%	−0.512	+0.350
CYTBCytochrome b	1,145 bp	26.3%	32.2%	12.5%	29.0%	41.49%	−0.398	−0.101
12S rRNA12S ribosomal RNA	951 bp	33.5%	23.2%	19.5%	23.8%	43.22%	−0.100	+0.181
16S rRNA16S ribosomal RNA	1,668 bp	35.5%	26.9%	17.3%	20.3%	37.59%	−0.081	+0.137
D-loopControl region (D-loop)	1,119 bp	31.5%	34.0%	14.2%	20.2%	34.41%	−0.174	−0.038

Codon usage

Counts per codon, darker is more frequent

Gene

3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%

UUU147

UUC98

Leu L17.5%

UUA196

UUG17

CUU149

CUC115

CUA172

CUG19

Ile I8.8%

AUU220

AUC114

Met M4.3%

AUA127

AUG37

Val V4.7%

GUU61

GUC27

GUA79

GUG13

Ser S7.1%

UCU51

UCC54

UCA99

UCG9

AGU20

AGC37

Pro P5.5%

CCU60

CCC50

CCA98

CCG3

Thr T7.3%

ACU71

ACC85

ACA116

ACG7

Ala A7.4%

GCU72

GCC111

GCA93

GCG6

Tyr Y3.2%

UAU70

UAC52

His H2.6%

CAU46

CAC54

Gln Q2.5%

CAA86

CAG10

Asn N3.9%

AAU71

AAC79

Lys K2.3%

AAA81

AAG5

Asp D1.9%

GAU41

GAC31

Glu E2.5%

GAA90

GAG6

Cys C0.6%

UGU12

UGC12

Trp W3.2%

UGA112

UGG9

Arg R1.9%

CGU14

CGC15

CGA37

CGG6

Gly G6.0%

GGU49

GGC70

GGA82

GGG27

Stop 0.2%

UAA7

UAG0

AGA0

AGG1

Genome map

38 annotated features in NC_023527.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (39.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Mustelus griseus (NC_023527.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,020	951 bp	+	43.2%
tRNA-Val	Transfer RNA	1,021	1,092	72 bp	+	–
16S rRNA	Ribosomal RNA	1,093	2,760	1,668 bp	+	37.6%
tRNA-Leu (UUR)	Transfer RNA	2,761	2,835	75 bp	+	–
ND1	Protein-coding gene	2,836	3,810	975 bp	+	39.2%
tRNA-Ile	Transfer RNA	3,811	3,880	70 bp	+	–
tRNA-Gln	Transfer RNA	3,882	3,953	72 bp	−	–
tRNA-Met	Transfer RNA	3,954	4,022	69 bp	+	–
ND2	Protein-coding gene	4,023	5,067	1,045 bp	+	39.1%
tRNA-Trp	Transfer RNA	5,068	5,138	71 bp	+	–
tRNA-Ala	Transfer RNA	5,140	5,208	69 bp	−	–
tRNA-Asn	Transfer RNA	5,209	5,281	73 bp	−	–
tRNA-Cys	Transfer RNA	5,317	5,385	69 bp	−	–
tRNA-Tyr	Transfer RNA	5,387	5,456	70 bp	−	–
COX1	Protein-coding gene	5,458	7,014	1,557 bp	+	39.8%
tRNA-Ser (UCN)	Transfer RNA	7,015	7,085	71 bp	−	–
tRNA-Asp	Transfer RNA	7,089	7,158	70 bp	+	–
COX2	Protein-coding gene	7,166	7,856	691 bp	+	39.1%
tRNA-Lys	Transfer RNA	7,857	7,930	74 bp	+	–
ATP8	Protein-coding gene	7,932	8,099	168 bp	+	28.6%
ATP6	Protein-coding gene	8,090	8,773	684 bp	+	35.7%
COX3	Protein-coding gene	8,773	9,558	786 bp	+	41.9%
tRNA-Gly	Transfer RNA	9,561	9,630	70 bp	+	–
ND3	Protein-coding gene	9,631	9,979	349 bp	+	41.8%
tRNA-Arg	Transfer RNA	9,980	10,049	70 bp	+	–
ND4L	Protein-coding gene	10,050	10,346	297 bp	+	42.4%
ND4	Protein-coding gene	10,340	11,720	1,381 bp	+	38.6%
tRNA-His	Transfer RNA	11,721	11,789	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,790	11,856	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,857	11,928	72 bp	+	–
ND5	Protein-coding gene	11,929	13,758	1,830 bp	+	36.8%
ND6	Protein-coding gene	13,754	14,275	522 bp	−	39.3%
tRNA-Glu	Transfer RNA	14,276	14,345	70 bp	−	–
CYTB	Protein-coding gene	14,348	15,492	1,145 bp	+	41.5%
tRNA-Thr	Transfer RNA	15,493	15,564	72 bp	+	–
tRNA-Pro	Transfer RNA	15,567	15,635	69 bp	−	–
D-loop	Control region	15,636	16,754	1,119 bp	–	34.4%